Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01536 ATGTCGTCTTCACCAAACAAACCTAAGAAACCTTTTCTTCCTTGGAAAACTCGCGTTGGTCTTTCTTTCGTTACAACTTTAACGGACGCTACACGTCGCTCTAACGGTACCGTTAATCGCCGTTTTCTCAATCTTCTAGATCGTAAATCTTCTCCTAATGCCACTCCCGTTAACGGCGTTTCAACCAAAGACGTTATTGTTAACGCCGAACATAATGTTTGGTTCCGTCTTTTCACTCCCACCGGATCCACCGTCGGAGATGAAACTGAAACCGGAAAAACCGGAACGGCCTCTCTTCCGGTCATCTTTTTCTTCCACGGTGGTGGATTTACCTATCTCTCACCTGCTTCTGTCGCTTACGATGCTGTTTGCCGTAGATTCTGCCGGAAAATTAACGCCGTTGTTGTTTCTGTTAACTACCGTCTCACACCGGAGTATCGGTACCCGTCGCAATATGAAGACGGAGAATCCGTGCTGAAATTTCTCGACGAGAATAAATCTATTTTACCGGAAAATGCTGACGTGTCAAAATGTTTTATTGCCGGAGACAGTGCTGGTGCAAATATAGCACATCATGTTGCGGTTCGGGTTTGCAAAGCGGGGCTCCAGAGAATCCGGGTTATTGGGTTGGTTTCCATCCAACCGTATTTCGGAGGGGAGGAACGGACTGAGTCGGAGATTCGTCTTGAAGGGTCACCTTTGGTGTCGATGGCGAGGACGGATTGGTTGTGGAAGGTGTTTTTGCCCGAGGGATCGGATCGTGATCATGGTGCAGCTAATGTTAGTGGGCCAAATGCGGAGGATTTGTCGGGTTTGGATTATCCGGATACACTTGTTTTTGTGGGTGGGTTTGACCCGTTAAGTGATTGGCAAAAGAGGTATTTTGATTGGTTGAAAAAATGTGGTAAAAATGCCGAGTTGATTGAATATCCGACTATGATTCATGCTTTTTATGTTTTCCCTGATTTGCCCGAGGCTACTCAGTTGATTTTGCAAGTCAAGGATTTCATCGATAGAGTTTCCAACAATTCTAAATGA 1038 0.4566 MSSSPNKPKKPFLPWKTRVGLSFVTTLTDATRRSNGTVNRRFLNLLDRKSSPNATPVNGVSTKDVIVNAEHNVWFRLFTPTGSTVGDETETGKTGTASLPVIFFFHGGGFTYLSPASVAYDAVCRRFCRKINAVVVSVNYRLTPEYRYPSQYEDGESVLKFLDENKSILPENADVSKCFIAGDSAGANIAHHVAVRVCKAGLQRIRVIGLVSIQPYFGGEERTESEIRLEGSPLVSMARTDWLWKVFLPEGSDRDHGAANVSGPNAEDLSGLDYPDTLVFVGGFDPLSDWQKRYFDWLKKCGKNAELIEYPTMIHAFYVFPDLPEATQLILQVKDFIDRVSNNSK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01536 345 SUPERFAMILY alpha/beta-Hydrolases 17 340 IPR029058 -
Trre12g01536 345 Gene3D alpha/beta hydrolase 3 345 IPR029058 -
Trre12g01536 345 FunFam Probable carboxylesterase 18 4 345 - -
Trre12g01536 345 Pfam alpha/beta hydrolase fold 102 318 IPR013094 GO:0016787
Trre12g01536 345 PANTHER ARYLACETAMIDE DEACETYLASE 40 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01536 Trre-Chr12 15187450 15188487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01536 10 338 Carbohydrate Esterase AT3G05120 37.425 2.04e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01536 - - gmx:100812296 507.294