Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01535 ATGAGAATAAATCATCACACTATCATTTCTAAATTCTATCATTTCTTCGTTCACTTGAAAAACCTCATAAAGACGATTTTATCTTCACCAAACAAACCCAAACCCTTTCTTCCTTGGATAAATCACGTTGTTATTTTCTTCCTTACTACTTTTGCGGACGCTGCATGTCGCTCTAATGGCACCGTTAATCGCCGTTTTTTAAATTTGTTAGATCGCAACTCTTCACCTAATCACACTCCTGTTAACGGCGTTTCCACTAAAGATGTTACCGTTAATGCCGAACATAACGTTTGGTTCCGTCTTTTCACACCCACCGGAGATGGAACCAAAACAGGTTCCCTTCCTGTCATCATTTTCTTCCACGGCGGAGCATTTACCTATCTCTCACCCGCCTTTGTTGGTTACGACATTATTTGCCGTAGATTCTGCCGAAAAATTAACGCCGTGGTTGTCTCAGTCAACTACCGTCTCACACCGGAGCATCGATACCCATCACAATACGAAGACGGAGCATCCGTGTTGAAATTCCTAGATGAGAATAAATATGTTTTACCCGAAAATGCTGACGTTTCAAAATGTTTCATTGCCGGAGACAGTGCTGGTGCAAATATAGCACATCACATTGCGGTTCAGGTTTGCAAAACGGGGCTCAAGAATCTCCGGGTAATCGGGTTGGTTTCGATCCAACCTTTTTTTGGAGGGGAGGAGCGGACTGAGGCGGAGATACGTCTTGAAGGCTCGCCGTTGGTGTCAATGGCAAGGACAGATTGGCATTGGAAGGTGTTTTTGCCTGAAGGATCGGATCGGGATCATGGCGCAGCTAATGCTAGTGGGCCGAATGCTGAGAATTTGTCGGGTTTGTATTATCCCGATACACTTGTTTTCGTGGCCGGGTTTGACCCGTTAAAAGATTGGCAAAAAAGGTATTATGATTGGTTGAAAAAATGCGGTAAAAAATGTGAGTTGATTGAATATCCGACTATGATTCATGCTTTTTATATTTTCCCTAATTTGTCTGAGTCTACTCAGTTGATTTTGCAAGTCAAGGATTTCATCAATAGAGTCTCCAACAATCATAAATGA 1083 0.4257 MRINHHTIISKFYHFFVHLKNLIKTILSSPNKPKPFLPWINHVVIFFLTTFADAACRSNGTVNRRFLNLLDRNSSPNHTPVNGVSTKDVTVNAEHNVWFRLFTPTGDGTKTGSLPVIIFFHGGAFTYLSPAFVGYDIICRRFCRKINAVVVSVNYRLTPEHRYPSQYEDGASVLKFLDENKYVLPENADVSKCFIAGDSAGANIAHHIAVQVCKTGLKNLRVIGLVSIQPFFGGEERTEAEIRLEGSPLVSMARTDWHWKVFLPEGSDRDHGAANASGPNAENLSGLYYPDTLVFVAGFDPLKDWQKRYYDWLKKCGKKCELIEYPTMIHAFYIFPNLSESTQLILQVKDFINRVSNNHK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01535 360 PANTHER ARYLACETAMIDE DEACETYLASE 64 339 - -
Trre12g01535 360 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 117 132 IPR002168 GO:0016787
Trre12g01535 360 Gene3D alpha/beta hydrolase 28 360 IPR029058 -
Trre12g01535 360 Pfam alpha/beta hydrolase fold 117 333 IPR013094 GO:0016787
Trre12g01535 360 SUPERFAMILY alpha/beta-Hydrolases 44 355 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01535 Trre-Chr12 15180431 15181513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01535 57 353 Carbohydrate Esterase AT3G05120 37.419 4.82e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01535 - - gmx:100799285 479.944