Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01534 ATGTCATCACCAAACAAACCAAAACCCCTCCTTCCTTTGAAATCCCGCCTTTCGATTTCATTACTTATGACTTTAACGGATGCTTCATGTCGATCTAATGGCACCGTTAACCGCCGTCTTCTCAACATTCTGGAACGTAAATCATCGGCTAAAGCCACTCCCATCAATGGTGTATCCACAACAGATATAACCGTTAACGCCGAATGTAACATTTGGTTTCGTCTCTTCACTCCCACCAACGATGTTACCGGAGTTGAAGGTGACAACAAAACTGCCTCCCTTCCCGTTGTCATTTTCTTCCATGGAGGAGGCTTCACGTTTCTCTCTGCCGCTTCAACATCCTACGATGCCCTTTGCCGTCGATTCTGCCGAGAAATCAATGTTGTTGTTGTCTCTGTCAATTACCGCCGCACACCGGAGTATTGCTATCCGACGCAATACGAAGATGGAGAAGCCGTACTAAGATTCCTTGATGAGAACAAATCCATTTTACCGGAAAATGCTGATGTGTCAAAATGTTTCCTCGCAGGGGACAGTGCGGGTGGAAATCTATCACATCATGTTGCGGTTCGGGCTTGCAAAGCGAGGTTACAAAAAATCCAAGTAATCGGGTTGATTTCAATCCAGCCGTTTTTTGGTGGTGAGGAGCGAACAGAGGCGGAGATTCGCCTTGAAGGGTCACTGATGATTTCGATGGCAAGGACGGATTGGATGTGGAAGGTATTTTTGCCAGAGGGATCAAATCGGGATCATGGAGCGGCTAATGTAAGCGGGCCGAATGCGGAGGATTTGTCGGGTTTGGATTTTCCACATACACTTGTTTTTGTGGGTGGGTTTGACGCATTAATTGATTGGCAAAAGAGATATTATGATTGGTTGAAGATATCTGGAAAAAGGGTTGAATTGATTGAATACCCAAACATGATGCATGGTTTTTATGCATTTCCTGATTTGCCTGAGTCTTCTCAGTTTATATTGCAAGTCAAGGATTTTATCAACAATAGAGTCTCCAATTATAAATGA 1023 0.4428 MSSPNKPKPLLPLKSRLSISLLMTLTDASCRSNGTVNRRLLNILERKSSAKATPINGVSTTDITVNAECNIWFRLFTPTNDVTGVEGDNKTASLPVVIFFHGGGFTFLSAASTSYDALCRRFCREINVVVVSVNYRRTPEYCYPTQYEDGEAVLRFLDENKSILPENADVSKCFLAGDSAGGNLSHHVAVRACKARLQKIQVIGLISIQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHGAANVSGPNAEDLSGLDFPHTLVFVGGFDALIDWQKRYYDWLKISGKRVELIEYPNMMHGFYAFPDLPESSQFILQVKDFINNRVSNYK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01534 340 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 97 113 IPR002168 GO:0016787
Trre12g01534 340 Gene3D alpha/beta hydrolase 2 339 IPR029058 -
Trre12g01534 340 SUPERFAMILY alpha/beta-Hydrolases 41 334 IPR029058 -
Trre12g01534 340 Pfam alpha/beta hydrolase fold 97 313 IPR013094 GO:0016787
Trre12g01534 340 PANTHER ARYLACETAMIDE DEACETYLASE 38 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01534 Trre-Chr12 15167395 15168417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01534 8 333 Carbohydrate Esterase AT3G05120 37.237 7.72e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01534 - - gmx:102665243 453.751