Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01515 ATGCTTGAGTTACTTTCATCTCGTTGTGTGGAATCGTTGAAACATGTTTATGAATCCGAGATCGATACTTTGATTAAGGATCTAATGTTGTATATTAATGGAAAAAACAAGGTTAAGGTTGTGATTAGTGAATGGATGGAAAAGTTAACATTTAATATAATCACAAAAATGATTGGTGGGAAAAGGTATTTTGAGTATAATTTGCAAGATATGGATAATGAAGAAAATGGTCATATTGTGAAACTAATAAAAGAATATATGCATATATCTGGTGAATTTGTTCCTTCAGATTTGATTCCAATTCTTGGTTGGTTTGGTTTTCAAGGACAAGTGCTTAAATCTATGAAAAAAGTTTCTAGAGATTTGGATAAACTTGTTGGAAGCTGGATTGAAGAGCATGAAGTTGTTGATGTGAATAAGTTAAATGATAAACATGATTTCATTGATGTTATGCTTTCTGTGATTGATGATGATCCTGCTTCTGGTCATAATCGTGATACTATCATCAAGGCAAATATTACGATGCTTATGTTGGCTGGGTCAGACACAATTTTCACAACAATGACATGGACCCTAGCCTTATTGTTGAATAATAAGAATGCTTTAAAGCGTGCACAAGAGGAAATTGATCACCACATAGATTTGGCAATGGATGAAGTTGTTGATATGAAAGAAGGGTTGGGTATAACCTTGCCCAAGTTAACTCCATTGCAACTTCTTTTGACACCAAGATTATCCTATGGACTTTATCAATAA 756 0.332 MLELLSSRCVESLKHVYESEIDTLIKDLMLYINGKNKVKVVISEWMEKLTFNIITKMIGGKRYFEYNLQDMDNEENGHIVKLIKEYMHISGEFVPSDLIPILGWFGFQGQVLKSMKKVSRDLDKLVGSWIEEHEVVDVNKLNDKHDFIDVMLSVIDDDPASGHNRDTIIKANITMLMLAGSDTIFTTMTWTLALLLNNKNALKRAQEEIDHHIDLAMDEVVDMKEGLGITLPKLTPLQLLLTPRLSYGLYQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01515 251 Pfam Cytochrome P450 14 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01515 251 PRINTS E-class P450 group I signature 168 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01515 251 PRINTS E-class P450 group I signature 188 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01515 251 PRINTS E-class P450 group I signature 49 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01515 251 SUPERFAMILY Cytochrome P450 3 215 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01515 251 Gene3D Cytochrome P450 1 236 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01515 251 PANTHER CYTOCHROME P450 82C3-RELATED 218 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01515 Trre-Chr12 14922196 14924982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01515 201 250 Cytochrome P450 AT4G31970 46.000 1.75e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01515 - - gmx:100790675 287.73