LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre12g01502	ATGGCTTCCATTGCTGCTTCAACTGCAGCTGCTTCACTTGGAATGTCAGAAATGCTTGGAAGTCCAATTAAATTCAGTGGTGCAACAAGAACTGTTCCTTCTTCTTCAACTTCTTCTACCTTCAAAACTGTTGCTCTTTTCTCTAAGAAGAAACCAGCACCACCACCAAAGAAAGCTGTAGTTACTCCGGCTAGCGAGGAACTTGCCAAGTGGTATGGTCCGGACAGAAGGATCTTCTTGCCAGATGGTCTCTTGGACAGGTCTGAGATCCCTGAGTACTTGACTGGAGAAGTCCCTGGAGACTATGGTTATGATCCTTTTGGCCTAAGCAAGAAGCCCGAAGACTTCGCCAAATATCAAGGATATGAGTTGATTCATGCTAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATATGGCGCCAACTGTGGTCCCGAGGCTGTTTGGTTCAAGACAGGAGCTCTACTTCTCGACGGGGGTACGTTGAACTACTTCGGAAAAAGCATCCCTATCAATCTTGTTGTTGCTGTCATTGCTGAGGTTGTTCTTTTGGGAGGTGCTGAGTACTACAGAATTACCAATGGACTGGAATTGGAAGACAAGCTTCACCCAGGTGGTCCATTTGATCCATTAGGTCTAGCAAATGATCCAGACCAAGCTGCAATTCTAAAAGTGAAAGAAATCAAGAATGGTAGACTTGCTATGTTTTCCATGCTTGGTTTCTTCATTCAAGCTTATGTGACAGGTGAAGGTCCTGTTGAGAATTTTGCAAAACATCTCAGTGACCCTTTTGGCAACAATTTGCTCACTGTTATTGCTGGAAATGTTGAAAGGGCTCCAACTCTGTGA	870	0.4483	MASIAASTAAASLGMSEMLGSPIKFSGATRTVPSSSTSSTFKTVALFSKKKPAPPPKKAVVTPASEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKSIPINLVVAVIAEVVLLGGAEYYRITNGLELEDKLHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENFAKHLSDPFGNNLLTVIAGNVERAPTL	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre12g01502	289	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	33	279	IPR001344	GO:0009765\|GO:0016020
	Trre12g01502	289	Pfam	Chlorophyll A-B binding protein	91	252	IPR022796	-
	Trre12g01502	289	SUPERFAMILY	Chlorophyll a-b binding protein	71	279	-	-
	Trre12g01502	289	Gene3D	Chlorophyll a/b binding protein domain	78	289	-	-
	Trre12g01502	289	FunFam	Chlorophyll a-b binding protein, chloroplastic	78	289	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre12g01502	Trre-Chr12	14838158	14841357	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre12g01502	11	289	Chloroplast and Mitochondria Gene Families	AT4G10340	83.214	2.44e-154	430

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre12g01502	K08916		-	gmx:100806585	498.434