Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01467 ATGTCAAAACTAAGGTTACTTGCTTTCCAAGGAAACCAAAGGGACTTTAACAACTCTGTCTATTCTTCAAAGGTAATAAACTCAGTGTACCTTTTATCAGGTCTTAAATTTTTGCCTAAAAATTTGAGATATTTTGAGTGGTATGGATATCCATCAAAGTCTCTGCCACCAACTTTTTGTCCTGAGAAGCTTGTTGAGCTCTCCCTGCCATACAACAATGTGGAAAAACTTTGGGACGGAGTACAGAATCTACCAAGTTTGCAAAAGATTGACCTTCGTTGCTCCACAAGCCTGAAAGAGTGCCCGAATTTATCCCGTGCCCCAAATCTTAAATATGTAGGACTAAGCCACTGTAAAAGTTTGTCACATGTTGATCCATCAGTTTTATCTCTTGAGAAGCTTGAAGTTTTAAGTGTGAGTGGATGCACCTCACTTAAGAGCCTTTGTAGCAGCACTTGTTCACCCTTTCTCCGAGAAGTGTACGCTTCTCGTTGCTATAGTCTTCAAGAGTTCTCTGTCACATTAATGCCTCGTGAATGCAATCCCTCCGCAACTCCTTTCTGTTTGAACTTAGGAGATTCAGGTTTGAATGAAGTGCCATCATCAATTTTGAGTATGAAAAGTCTTGGAAAGTTTTCTTTTCCCATCAGTAAGAGTCTCATGCATCTTCCTGAAAACTTTGCCGGCGAAATTACATTATCTGACTCAAGAAAACAAGAATGTGACACTTTCGTCACCTTAAACAAAGTACTTCCTAGCCCTGGATTTCGGAGTGTAACACGTTTATTTTTTGACTTCTGTCATAGCTTGTATGAAATTCCAGACAGTATCTCCTTTTTATCATCATTGGAGTATTTAAGACTATATGATTGTACCATCAAAAGCTTGCCTGAAAGTGTGAAGTATCTTCGACGACTTCAACAGATTTGA 930 0.3903 MSKLRLLAFQGNQRDFNNSVYSSKVINSVYLLSGLKFLPKNLRYFEWYGYPSKSLPPTFCPEKLVELSLPYNNVEKLWDGVQNLPSLQKIDLRCSTSLKECPNLSRAPNLKYVGLSHCKSLSHVDPSVLSLEKLEVLSVSGCTSLKSLCSSTCSPFLREVYASRCYSLQEFSVTLMPRECNPSATPFCLNLGDSGLNEVPSSILSMKSLGKFSFPISKSLMHLPENFAGEITLSDSRKQECDTFVTLNKVLPSPGFRSVTRLFFDFCHSLYEIPDSISFLSSLEYLRLYDCTIKSLPESVKYLRRLQQI 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01467 309 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 226 IPR044974 GO:0006952
Trre12g01467 309 Pfam Leucine Rich Repeat 63 82 IPR011713 -
Trre12g01467 309 Gene3D Ribonuclease Inhibitor 1 181 IPR032675 -
Trre12g01467 309 Gene3D Ribonuclease Inhibitor 187 309 IPR032675 -
Trre12g01467 309 SUPERFAMILY L domain-like 31 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01467 Trre-Chr12 14544131 14545437 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01467 27 309 WRKY Transcription Factor Family AT4G12020 30.584 4.57e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01467 - - lja:Lj3g3v2692950.1 323.168