Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01449 ATGGTGGTGAGACTAAAGCTTCAACTTAAGCTTGTTCTTCAGATGAAACCTTCCTTGAAATCCAGGTTCAGATTCAATCTTCATTATTGTTTGTTGAAACAATGCATTCTTGTTTGCTTGCTGGAGGGTGTTGGTGTCCTTGGGATTCAACACGTTGCATCATGCCTTCAACAACAGTGTGAAAGAACTGTTGGATGCAATCTCTCTCTGTCATACTCAAAGGAACTATGTTATCAGTCAATTTTTCCACAAGGAACCATTGGAAATCCATGTGGTGGAAACTCTACAATGATTAAGCTTGTGTGCTTAGATGCTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTTCTGTCATATCAAGCAATTCCTTGGCTGTCAAGATTCTTTATCTCATATTTTGGGGTTTGATGACTCTCAGGTAA 429 0.3963 MVVRLKLQLKLVLQMKPSLKSRFRFNLHYCLLKQCILVCLLEGVGVLGIQHVASCLQQQCERTVGCNLSLSYSKELCYQSIFPQGTIGNPCGGNSTMIKLVCLDAEGPFKYGIYQWALSVISSNSLAVKILYLIFWGLMTLR 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01449 142 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 47 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01449 Trre-Chr12 14362827 14364964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01449 46 141 Ion Channels AT5G15410 65.657 1.01e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01449 K05391 - gmx:100798823 153.68