Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01432 ATGGCGAAAAACAAATGGAGTGTGTTTGAGTTCTGGTTTTTCTTCGTAATCTACATCGTGATCTGTGCTAGGGTTTGTTCTCCTGGTAGATCCGATAAGGAAACTCGTGAAAGGTTTTATGGTAATATGCTTAATTCATCTGCACCTGAATCTAATGATGGTACTTTGGCTAAGATGTTCGATCGTGTTCTTGAGAAGGAGTTTTCTGAGAATGATCAACCTGAAGAACCGGATAAAAACAGCTTTAATAGCAGTGTAGCTGATCAGCAGGCAGTACTGGAGACTGTAGCTAAAATTACTCATGATAAAGCTAAGAGAAATGATACGCGTGAGGGAAATGCCACAAGATCATTTCAGTTTCAAGATGTGTTCTCTCTGGAAAATGAAGATTCTGATGATGTTACAACTTTGATTGACAAAAAGGACAATGTCTTTGTGATGTCAAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTGAGGCTAATATCAGATTTGGTGGTCATCATAGTTTCTGCAGCCATCGGGGGAATTGTCTTTTCCTGTTTGGGGCAACCGGTTATTGTGGGATATCTTCTTGCAGGCTCACTTATTGGACCAGGGGGTTTGAAATTCATCAGTGAATTGGTACAGGTTGAAACTGTTGCACAATTTGGGGTAGTGTTTCTTCTCTTTGCTTTGGGGCTGGAGTTTTCCTTGGCAAAGTTAAAAGCTGTGGGGCCTGTTGCTGTTCTTGGCGGGTTGCTTCAAATTGTAATTTTCATGTTCCTTTGTGGAATTCTTGCCATGGTATGTGGAGGAAAATTGTCTGAGGGTGTTTTTGTTGGTTCCTTTCTGTCAATGTCATCAACAGCAGTGGTGGTGAAGTTTTTGGTGGAACGGAATAGTAATAATGCTCTTCATGTTCAAGTTACAATTGGCACTCTTATTTTTCAGGATTGTGCAGTGGGTCTATTATTTGCTTTGCTCCCAGTCTTGGGTGGTAACAGTGGTCTTTTACAAGGGATTATTTCAATGGGTAAACTGTTGCTAGTGTTGTCCTTGTATCTCACTGCTACATCGATATTGTCTTGGTCGTTTGTTCCTCGCTTTCTCAAACTAATGATGCGGCTCTCATCTCAGACAAATGAACTTTATCAGCTAGCTGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAACTTGGTCTTAGTCTTGAGCTGGGTTCATTTATGGCAGGTGTTATGATTTCTACAACAGACTTTGCTCAACATACTTTGGACCAGGTGGAACCAATTCGTAACTTATTTGCCGCTCTCTTCCTCTCAAGTATTGGAATGCTTATACATGTGCAGTTTCTTTGGAACCATGTGGATATCTTGCTTGCATCTGTTATTTTGGTTGTTGTTGTCAAGACTGCTGTTGTTGCTATAGTTACAAAAGCCTTTGGGTATAGTCTTAAGACAGCATTTATTGTTGGTATCTCACTTGCACAAATAGGAGAATTTGCTTTTGTTCTGCTGAGTCGTGCTTCAAATCTTCATCTTGTTGAGGGGAAAATGTATCTTCTCCTTCTAGGGACAACGGCTCTCAGTCTGGTCACGACTCCACTTTTGTTTAAACTGATACCGGCTGTCATGAATCTGGGTGTTCTCATGCACTGGTTCCCCTCTGAAAATGGCACACAAAATGAGGGAAAAGCTTTGAATATTGAAACAAACAGAATGTTGTGA 1722 0.4071 MAKNKWSVFEFWFFFVIYIVICARVCSPGRSDKETRERFYGNMLNSSAPESNDGTLAKMFDRVLEKEFSENDQPEEPDKNSFNSSVADQQAVLETVAKITHDKAKRNDTREGNATRSFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVIIVSAAIGGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISELVQVETVAQFGVVFLLFALGLEFSLAKLKAVGPVAVLGGLLQIVIFMFLCGILAMVCGGKLSEGVFVGSFLSMSSTAVVVKFLVERNSNNALHVQVTIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIISMGKLLLVLSLYLTATSILSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVQFLWNHVDILLASVILVVVVKTAVVAIVTKAFGYSLKTAFIVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPSENGTQNEGKALNIETNRML 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01432 573 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 14 564 IPR045158 GO:0015386|GO:0071805|GO:1902600
Trre12g01432 573 Gene3D - 161 544 IPR038770 -
Trre12g01432 573 Pfam Sodium/hydrogen exchanger family 168 537 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01432 Trre-Chr12 14222005 14230855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01432 29 570 Antiporters AT5G51710 82.472 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01432 K26735 - gmx:100810302 946.421