Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01423 ATGAAGCTAATACTTCATAAACTTGGTTCTAATTTGACTGGTGGTTGTATGAACCCTGCATCGGTAATGGGATGGGCTTTTGCTCGAGGGGATCACATATCAAAAGGAGCACATCCTTGTATACCGGCTTGCCCCTATAAAGGCCACTCTTTTGGCAGTTTGGATGTTCAAATTTCTAGTACGGCATGCAAAAAAAAATAG 201 0.4179 MKLILHKLGSNLTGGCMNPASVMGWAFARGDHISKGAHPCIPACPYKGHSFGSLDVQISSTACKKK 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01423 66 SUPERFAMILY Aquaporin-like 4 54 IPR023271 -
Trre12g01423 66 PANTHER AQUAPORIN SIP2-1-RELATED 1 35 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01423 Trre-Chr12 14159477 14160460 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01423 2 35 Major Intrinsic Protein MIP AT3G56950 79.412 1.82e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01423 K09875 - mnt:21410578 67.3958