Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01422 ATGTTCTTCTATGCTTTTCTTGCTAAATTTTTTCGTGGTGGAGCTAACAATCCTCTTGCTACTTTGGTTGATGCTATCTCTGGAGATTTTCATAACTTTGTTTTTTGCATTGGTTCCAGAATTCCTGCTCAGGTGATTGGATACATTGTCCGAGTAAAACTTCTTACAGATATCATCCCTGAAATAGGACACGGGCCACGTTTGAATGTTGACATTTATCGAGGAGCATTGACCCGAAGGATTGTTAACATTTACAATTGCAGTCATTACACTTGGGATTACTGCAACAAAAATTCGTAG 300 0.3833 MFFYAFLAKFFRGGANNPLATLVDAISGDFHNFVFCIGSRIPAQVIGYIVRVKLLTDIIPEIGHGPRLNVDIYRGALTRRIVNIYNCSHYTWDYCNKNS 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01422 99 PANTHER AQUAPORIN SIP2-1-RELATED 1 82 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01422 Trre-Chr12 14158369 14159442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01422 1 85 Major Intrinsic Protein MIP AT3G56950 45.882 9.26e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01422 K09875 - gmx:100786138 114.775