Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01421 ATGGTTGTTGTATCAGATTTTGCTCTGTCATTCATGTGGGTGTGCTCTAGTGTTCTCCTAAAAACATTTGTAAAAAAAATTATAAGCTTTAATCATTCCCATGTGGTTGAGATTGTGAAAATTGGTTTTTCCATAGCCAACATGTTCTTCTATGCTTTTCTTGCTAAATTTTTTCGTGGTGGAGCTAACAATCCTCTTGCTACTTTGGTTGATGCTATCTCTGGAGATTTTCATAACTTTGTTTTTTGCATTGGTTCCAGAATTCCTGCTCAGGTGATTGGATACATTGTCCGAGTAAAACTTCTTACAGATATCATCCCTGAAATAGGACACGGGCCACGTTTGAATGTTGACATTTATCGAGGAGCATTGACCCGAAGGATTGTTAACATTTACAATTGCAGTCATTACACTTGGGATTACTGCAACAAAAATTCGTAG 441 0.3696 MVVVSDFALSFMWVCSSVLLKTFVKKIISFNHSHVVEIVKIGFSIANMFFYAFLAKFFRGGANNPLATLVDAISGDFHNFVFCIGSRIPAQVIGYIVRVKLLTDIIPEIGHGPRLNVDIYRGALTRRIVNIYNCSHYTWDYCNKNS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01421 146 PANTHER AQUAPORIN SIP2-1-RELATED 2 129 IPR044226 GO:0015267
Trre12g01421 146 SUPERFAMILY Aquaporin-like 6 108 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01421 Trre-Chr12 14158228 14159442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01421 2 132 Major Intrinsic Protein MIP AT3G56950 43.182 8.59e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01421 K09875 - gmx:100786138 159.458