Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01394 ATGTCTAAACATGAATCAAAAGAAGCTTTACAATTAGATTCAAATCCCACCGTTGATCCTATTATCATAAATCATGATGGTAGTGTCACAAGGCTCATGAAAATACCAAACACTAAACCCACACAAGACCCAAACAACATCGTTCTCACCAAAGATGTCCCTCTTAACCCTATTAACAAAACTTTCATACGTTTGTTCCTACCTCGTATAACACTTCACAATTCTAAAAAACTCCCTCTAATTGTTTACTATCATGGAGGTGGTTTTATATTCTTTAGCGCTTCATCTACGGTAAACCATGACTTTTGCGTTAAATTAGCGGAAAAAATTGGTGTCGTGGTTGCATCCGTGGATTACCGTCTTGCGCCAGAATACCGTCTCCCTGCCGCCTATGATGACGCGGTTGAGGCATTACATTGGTTGAGAACAACAAACGAGAAATGGGTGCATCAATTTTGTGATGTGTCCAATTTTTTTCTTATGGGATCTAGTGCGGGAGGGAATATTGCGTACCACACAAGTTTAAGTGTGGCCAAAACTCTTGATGAAGTTGATTTCGACAAATTTAAGATCAGAGGGTTGATATTGCACCATCCATTTTTTGGCGGGTCCACAAGGACAAATACAGAGTTGAGACTCGAAAATGATCGTGCTTTACCTCTTAAGGCGAGTGATCTAATGTGGGAGTTTGCATTGCCCGAGGGTGTAGGTAGGGACCATAAGTTTTGCAATCCAATGGTTGTGGATGAAGAAGATGACACATGTTTTGATAGAATCAAACAGTTGGGATGGAAGATTCTTTTGACGGGTTGTGATGGAGACCCCTTGATTGATCGTCAGGTTGAATTTGTGGAGATGTTGAGAAACAAAGGGATTGAAATTATGAGTTACTTTGGGGAAGGTTTTCATGGGATGGAACTATTGGAACCAAGGGGAGATGAACCACTATTTGACCAAATAAAATATTTGATATATAATTGTACCGCATTTGATAAATACTAG 1002 0.3972 MSKHESKEALQLDSNPTVDPIIINHDGSVTRLMKIPNTKPTQDPNNIVLTKDVPLNPINKTFIRLFLPRITLHNSKKLPLIVYYHGGGFIFFSASSTVNHDFCVKLAEKIGVVVASVDYRLAPEYRLPAAYDDAVEALHWLRTTNEKWVHQFCDVSNFFLMGSSAGGNIAYHTSLSVAKTLDEVDFDKFKIRGLILHHPFFGGSTRTNTELRLENDRALPLKASDLMWEFALPEGVGRDHKFCNPMVVDEEDDTCFDRIKQLGWKILLTGCDGDPLIDRQVEFVEMLRNKGIEIMSYFGEGFHGMELLEPRGDEPLFDQIKYLIYNCTAFDKY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01394 333 SUPERFAMILY alpha/beta-Hydrolases 20 310 IPR029058 -
Trre12g01394 333 Pfam alpha/beta hydrolase fold 81 297 IPR013094 GO:0016787
Trre12g01394 333 PANTHER ARYLACETAMIDE DEACETYLASE 31 305 - -
Trre12g01394 333 Gene3D alpha/beta hydrolase 18 328 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01394 Trre-Chr12 13912030 13913031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01394 21 309 Carbohydrate Esterase AT5G16080 36.184 4.68e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01394 - - psat:127130592 498.434