Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01391 ATGTCTAATCTAAATCCACCACCACCCACCAATGATCCCTACCAATTCCTCAAAATCCACCACAATCCCAACGACACACTCACTAGAAATTTTGAAGATCCACACACCTCACTTTCATTAGACACTACTCATCCAATTACACTTTTAGCCAAAGATCTCACAATCAACCAATCAAACAAAACATGGCTTCGTTTATTCCTACCTAAAAATTCAACAAACATAAACAAAAAGCTACCACTTATTGTTTTCTTTCATGGAAGTGGTTTCATTTTACTTAGTGCAGCCTCAACCATATTCCACAATTTTTGTGTCAAAATGGCCGACACGGTCGAAGCAGTTGTTGCCTCGGTCGATTATCGTCTTGCGCCAGAGCACCGGTTGCCGGCGGCATATCATGATGCTATGGAAGCATTGAGTTTCATTAGATCTAGTCAAGATGAATGGTTGACTAAATATGTTGACTTTTCTAAATGCTTTTTAATGGGGAATAGGTCTGGAGCCACAATCGCATACCATGCAGGACTACGTGTGGTTGAAAAGGTGAATGATCTTGAGCCGTTGAAAATTCAAGGGTTGATATTGCGTCAACCATTTTTTGGTGGGACCCAAAGGACTGAGTCAGAGTTGAGACTTGAGAATGATCATGAGTATTCTAATCTAATGGCTTTGAATGGTTTTGGTGAAAAATTTGATAAAATTAAGAATCAAGGGTGGAAAGTGTTGGTGAGTATGAACGGTGGGGATCCATTGGTTGATCGTAATAAAGAATTGGTGGAATTGATGGGAGAAAAGGGTGTGGAAGTGATTAAAGATTTTCAAGAAGAAGGTTATCATGGGGATGAGTTTTTTGAGGAATCCAAAGGAAAGAAATTTATTGAGTTGGTGAGGGGTTTCATTTCCTCGTTTGAGGCTTAA 915 0.3956 MSNLNPPPPTNDPYQFLKIHHNPNDTLTRNFEDPHTSLSLDTTHPITLLAKDLTINQSNKTWLRLFLPKNSTNINKKLPLIVFFHGSGFILLSAASTIFHNFCVKMADTVEAVVASVDYRLAPEHRLPAAYHDAMEALSFIRSSQDEWLTKYVDFSKCFLMGNRSGATIAYHAGLRVVEKVNDLEPLKIQGLILRQPFFGGTQRTESELRLENDHEYSNLMALNGFGEKFDKIKNQGWKVLVSMNGGDPLVDRNKELVELMGEKGVEVIKDFQEEGYHGDEFFEESKGKKFIELVRGFISSFEA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01391 304 PANTHER ARYLACETAMIDE DEACETYLASE 48 279 - -
Trre12g01391 304 Gene3D alpha/beta hydrolase 14 302 IPR029058 -
Trre12g01391 304 Pfam alpha/beta hydrolase fold 81 272 IPR013094 GO:0016787
Trre12g01391 304 SUPERFAMILY alpha/beta-Hydrolases 36 299 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01391 Trre-Chr12 13899618 13900532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01391 42 268 Carbohydrate Esterase AT5G16080 34.646 5.29e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01391 - - aprc:113866682 375.17