Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01390 ATGTCTCAAACATCTCAAATAATTGATCCCTACAAACACCTTCATCTCCTCAAAAACCCAAACAACACAATCACACGTTTACTTGAACTTCCATACACCTCACCTTCATCCGATCCAACACTTCCAATCTCAGTTCTCACAAAAGACATCACAATAAACAAAACAAACAAAACATGGGTTCGATTATTCCTACCAAACAAAACAATACCCACTAATCAAAAACTACCTCTTATTGTTTTCTTTCATGGAAGTGGGTTTATATTAGCTAGTGCTGGTTCAACTATGTTTCATGATTTTTGTGTGAAAATGGTTGATGATATTGGTGTTTTTGTTGTCTCTGTTGATTACCGTCTTGCACCGGAGCATCGATTGCCGGCGGCGTATGATGATGCTATGGAAGCTCTGTTTTGGATAAGAAGTATTGATGATGAGTGGGTGAGAAGTTATGTTGACTATTCTAAATGTTATCTCATGGGGAATAGTGCTGGTGCTACCATAGCCTACCACGCAGGTCTAAGGGCACTAGAAGTTGTGAAGGATCTTGAGCCAATGAAGATCCAAGGGTTAATATTACGCCAACCATACTTTGGTGGGAAAGAGAGAACCAAATCAGAGTTAGAGCTTCAGAACGATCCAATCATTCCATTGTGTGTTAATGATTTAATGTGGGAGTTAGCACTTCCAATTGGTGTTGACCGTGATCATGAGTATTCCAATCTAACGGTTGGGAATGGTCTTGAAAAGTTTGATAAAATAAGGGCCCTTGGATGGAAGGTTTTGGTTAGTGGGAATGGTGGTGATCCACTAGTGGATCATGAGAAAGAGTTGGCACAATTGATGGAGGAAAAAGGTGTTCATGTTGTGACGGATTTTGAGGATGATGGTTCTCATGGAATAGAGTATTCTGATCCATTGAAAGCTAAGAAATTGATTGAGTTAATTCAGGATTTTATTTCATAA 960 0.3906 MSQTSQIIDPYKHLHLLKNPNNTITRLLELPYTSPSSDPTLPISVLTKDITINKTNKTWVRLFLPNKTIPTNQKLPLIVFFHGSGFILASAGSTMFHDFCVKMVDDIGVFVVSVDYRLAPEHRLPAAYDDAMEALFWIRSIDDEWVRSYVDYSKCYLMGNSAGATIAYHAGLRALEVVKDLEPMKIQGLILRQPYFGGKERTKSELELQNDPIIPLCVNDLMWELALPIGVDRDHEYSNLTVGNGLEKFDKIRALGWKVLVSGNGGDPLVDHEKELAQLMEEKGVHVVTDFEDDGSHGIEYSDPLKAKKLIELIQDFIS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01390 319 Pfam alpha/beta hydrolase fold 78 298 IPR013094 GO:0016787
Trre12g01390 319 Gene3D alpha/beta hydrolase 11 319 IPR029058 -
Trre12g01390 319 PANTHER ARYLACETAMIDE DEACETYLASE 31 298 - -
Trre12g01390 319 SUPERFAMILY alpha/beta-Hydrolases 21 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01390 Trre-Chr12 13894629 13897348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01390 35 238 Carbohydrate Esterase AT1G68620 39.810 3.18e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01390 - - aprc:113866682 449.899