Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01385 ATGGGTAAGGAAAGGTATTGGATTGGAAAATCTTCCAAGAAAAGTGTTATAATTGAAGAAAATGAAACAAAAACAACACCAACACCACCTAGTGGTTGCATGTGTGCTGTTTTTCAATTCTTTGATTTTCATCCATTTCATTTCCCTAACTCCATAAATCATCCACAAGAAATCACTTCTTCTTGCATCTCAAAAGACCACACTACTACTACTACCGTCCCAAAAGGTGCTGAAGCTCCTAGGAATAGCTTGGAATCTAAAGATGGAATAGTTGCAGCTTCTTTTTCAAAAGAAGAAAATTTTAAAATTCCAATGAATATACAAATTAAAACAAAAAGGAGCAATGGTGGAAATTTGACTGATTTGTCCTCAGAAATAAGCACTTCACCAGGAACAAAGACACCAACTTTAGTTGCAAGATTAATGGGTTTAGAACTTCTTCCAAATCCAAACTCACCCTCTTTTTCTTCACCTCTTTCAACACCAAATTCACAAGGGAAGAACAATATTATTCAACATCTTCACCAAGCTAGAACAAACCAACAAAAAATTCAAACCAAAGCAAGAAATAGTATTGATAGTAGTGAAATTACAAGAATACCCTCATCTAGAAAATCAGATTTTTATCATCATAGACTCTCTCTTCAAATTAACAAAGAAAATAATCTTGGTGATGAGGATTTTGAGATACCTAGATTTTCATTTTCAAAGAGGAAAAATGATGAAAATAATTTCAAAAGCCCAAGTCAACATGCAAAACAAATTGTTAAACAAGTTAAGGAAAGTGTGGCTAGTAGAAAAGTTGGTCAAGACATTACCAACGTTCTCAAAAGCAAGCAGGATATCGACATTCAACAAAACGTTAGGGTATCAAATAATTTATCAACCAAAGATCATGAAGAATTTTTAGGACAATTAAGAATTAAGAAATGTCCTAAAACAACAACATTGAAAGATTCAAATCCTTCATCATGTTCACAAAGGATTAGATTCATAGAAAACAAACACAAGCCAAACACAACATCAAAAGATCAAAACACAAAACCAAAGGCTTATGCATTGAAAGAAGAGCAAGAATCAAGGGACAAGAAATTGGTCACAAAATGTAAGAAAGATACAAACGAAAAGTTTAGCTCAAGATTCAAAAGGCCTCCTCAAACATCAGATATAAACATTTGTCCAACATCAATTTCTAGAGCCAATGACATCAAAAGTAATGTAAAAAGCAAGAAAACTCAGTCATTATCAAACAATCTCCTCAACAACATCAATGTGGTCCAAAATGCTCTCTCTATTAAGACAGAGTCTTCTCCTCTGGCAACCAAAATTCATCAGAAACAGTCACAGGTGTCTGAAATTCAATGTAGTTTGAGCCAAAGGTACAAACAAGAAGGAACAGTTACACTCTCAACCCAAGAAACAAGCACCAACGTAATTGAAGACAAATTTAACGGTGTCTCTACCATAGAAACTCACAAAACAGAATTTCAGTACATCACAGAAATCTTAAACAAACATGTCACAACCACAACAACAAAGAATGTGTCCTTTAACACATGGTTCTCTCCAAAACATCAACTTGACCCATCAATCTTCAACCACCTTGAACACAATTTCGACAATAAAGATCGAAACTTTACAACAAAAAATCAACTGGGTCATCGTTGGAATCGAAAATTGATGTTCGATTTGGTGGATGAAGTTTTACTAGAGATTTTGAAGCAAAAGTGTTGGGAAAAAAAGCTATGTTTTTCGCAACGGTTTTGCGACCAGTTGACAATTACGGAATTAACGGAGAGAGTGTGGAAAAGGGTAGGAGAGTTTACATGTGCCAAATGTGAAGTTTTGGATGATATTGATAATTTGATTGAATCAGAAGATATGAAGAAATTGATCAAAGTTGAAGGTGAAGAAGAAAGAGAAGATTTGGTGATGGAGATTGAAGGCAACATACTAGACACATTGATGCATGAAAGTATTTTAGTTATGAGTATATGA 1998 0.3413 MGKERYWIGKSSKKSVIIEENETKTTPTPPSGCMCAVFQFFDFHPFHFPNSINHPQEITSSCISKDHTTTTTVPKGAEAPRNSLESKDGIVAASFSKEENFKIPMNIQIKTKRSNGGNLTDLSSEISTSPGTKTPTLVARLMGLELLPNPNSPSFSSPLSTPNSQGKNNIIQHLHQARTNQQKIQTKARNSIDSSEITRIPSSRKSDFYHHRLSLQINKENNLGDEDFEIPRFSFSKRKNDENNFKSPSQHAKQIVKQVKESVASRKVGQDITNVLKSKQDIDIQQNVRVSNNLSTKDHEEFLGQLRIKKCPKTTTLKDSNPSSCSQRIRFIENKHKPNTTSKDQNTKPKAYALKEEQESRDKKLVTKCKKDTNEKFSSRFKRPPQTSDINICPTSISRANDIKSNVKSKKTQSLSNNLLNNINVVQNALSIKTESSPLATKIHQKQSQVSEIQCSLSQRYKQEGTVTLSTQETSTNVIEDKFNGVSTIETHKTEFQYITEILNKHVTTTTTKNVSFNTWFSPKHQLDPSIFNHLEHNFDNKDRNFTTKNQLGHRWNRKLMFDLVDEVLLEILKQKCWEKKLCFSQRFCDQLTITELTERVWKRVGEFTCAKCEVLDDIDNLIESEDMKKLIKVEGEEEREDLVMEIEGNILDTLMHESILVMSI 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01385 665 MobiDBLite consensus disorder prediction 332 359 - -
Trre12g01385 665 MobiDBLite consensus disorder prediction 112 133 - -
Trre12g01385 665 Pfam DUF761-associated sequence motif 123 151 IPR032795 -
Trre12g01385 665 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 664 - -
Trre12g01385 665 Pfam Domain of unknown function (DUF4378) 495 658 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01385 Trre-Chr12 13771644 13775277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01385 105 659 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 30.283 1.42e-40 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01385 - - mtr:11427611 895.19