Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01375 ATGTTACATTCTCTGGAAGAACTCAATCTTAATGATTGTACTAGTCTCGAGAGTTTTTCACATGTGGTAGGGTTGGGGGAAAAACTTAAAACAATGAGTGTTAGAAGTTGCTTCAAGCTAAGGAGTATTCCACCTCTCAAGTTGACTTCTCTCGAAGAACTCGATCTTACAAATTGTACCAGTCTTCAGAATTTTCCACTTGTGGTCGACGAGTTTCTTGGAAAACTTAAAATCCTGCTTCTTGAAAATTGTCACAATCTTAAGAGCATTCCACCACTCAAGTTGGATGTGCTAGAGAAACTTGACCTTTCAAATTGTTATATGCTCAAGAGTTTTCCACTTGTGTTTGTCGACAAGGACACCTTCACAGTAACAACTAGGACACTTTCACAGTCAGCACCTGAGAGGTTGTTGCCCGGTTTTGATGTTAAGCTTCAGAAGATGACTGCTCAAAAGCCGAGGTCATGTTTTAAGCCTGCAAAAAGAGTGCTCGAATTTACAGTCACTGAAGGCAAAATCAAGATATTGGAAAAGATTGTACCAGATTGGATTTGCAAGAAGTTGGTTTCTTCTGGAGACACTATGTACTGCATCAAGAATGCGGTAGATTTGGAGTCAATTCGATCAAGACTTGTCAGCAATGTGACTGAAGGAGATGAGTGA 663 0.3997 MLHSLEELNLNDCTSLESFSHVVGLGEKLKTMSVRSCFKLRSIPPLKLTSLEELDLTNCTSLQNFPLVVDEFLGKLKILLLENCHNLKSIPPLKLDVLEKLDLSNCYMLKSFPLVFVDKDTFTVTTRTLSQSAPERLLPGFDVKLQKMTAQKPRSCFKPAKRVLEFTVTEGKIKILEKIVPDWICKKLVSSGDTMYCIKNAVDLESIRSRLVSNVTEGDE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01375 220 Gene3D - 124 218 IPR038090 -
Trre12g01375 220 PANTHER OS11G0677101 PROTEIN 2 149 - -
Trre12g01375 220 SUPERFAMILY L domain-like 2 114 - -
Trre12g01375 220 Gene3D Ribonuclease Inhibitor 1 123 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01375 Trre-Chr12 13672769 13677557 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01375 4 113 WRKY Transcription Factor Family AT4G12020 36.364 8.77e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01375 - - tpra:123907944 162.155