Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01372 ATGGATAAACATGATGCCAGCTCCTCCGGTCATAACATGAATAATAGATGGAAGATGTCTCTTCATCAAGTTGCTAATTTGTCTGGATTTCATTACAAGAAAGGGGATGGATATGAGCATGAGTTTATTGGGAAGATTGTTGAACAAGACATGGGGAAAGAAATTGTCAGACAAGAATCACCAGAAGAGCCTGGAAAACGCAGTAGGTTATGGTTCTCCAAAGATATAGTTCACGTTTTAGAAGAAAATACGGGAACAAGCTTTCCCGAGAAGATACCTGACCTATCATTTAATTGGGAAGACTTTCTCAAGCAGAAGTTTGAGAATATGAGAGTTTTAAAGATTAATCGCTGGATGCCTCCATGCTTAAAAACATTATCTGCCTTAAACTGCAAATCATTGACTTCGCCGTGTAAAAGCAAATTACTAAACCAGGAATTACACGAGGCTGGAAACACTTGGTTCCGTTTGCCATGGGCAAATATTCCAAAGTGGTTCGACCACCAATGCTTGGCAGGATCGTCAATTTCCTTCTGGTTTCGAAACAAGTTTCCTGCCATAGCTCTTTGCGTTGTTTCTCCAATAACGTTGGATGATTCTCGACGTCATGAGGAGCTGAAGAACATATTTGTTTCTGGAGATGTTGTGCCGCACTGGATTTGTAAGAAGTTCATTCCTGTTGGAGATGTTTTATACTGTTCTTCCACTTTCAAAATGGACTGGATGAAACTAATGGAACATATTATGGTGGGAATGTGGATGCCTCTTTTTCTGCTCGACATAACAGATTGGGGATATTTACTGGATAAGGGATGGATATGA 822 0.4002 MDKHDASSSGHNMNNRWKMSLHQVANLSGFHYKKGDGYEHEFIGKIVEQDMGKEIVRQESPEEPGKRSRLWFSKDIVHVLEENTGTSFPEKIPDLSFNWEDFLKQKFENMRVLKINRWMPPCLKTLSALNCKSLTSPCKSKLLNQELHEAGNTWFRLPWANIPKWFDHQCLAGSSISFWFRNKFPAIALCVVSPITLDDSRRHEELKNIFVSGDVVPHWICKKFIPVGDVLYCSSTFKMDWMKLMEHIMVGMWMPLFLLDITDWGYLLDKGWI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01372 273 Gene3D - 1 57 IPR035897 -
Trre12g01372 273 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 49 165 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01372 Trre-Chr12 13635166 13642521 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01372 49 115 WRKY Transcription Factor Family AT4G12020 45.070 4.20e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01372 - - tpra:123907944 163.31