Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01371 ATGCAGGTACAAGAGAAACTTTATTATTCTCAAGAGAAAATCAACCAAAATAAAATTGGTGTGGATGCATCGGATGACAATCCTTCATCATTGGTGGAACTGGTTAATGTGATTGACTCCATATTTAGTTCTGTCAAAAGAACTCTGATCACAAAAGAGGAGCTCCTGCAAAAGATAATGATGAACTGTTTAGATTTTGTTGAGATTAGCGAAGCTGAAGAACAGATCGAGATTTTGGAAAAGATTGTACCGGATTGGATTTGCAAGAAGTTGGTTTCTTCTGGAGACACTATGTACTGCGTCAACAATGCGGTAGATTTGGAGTCAATTCGATCAAGACTTCTCAGCAATGTGACCAAAGGAGATGAGTGA 372 0.3817 MQVQEKLYYSQEKINQNKIGVDASDDNPSSLVELVNVIDSIFSSVKRTLITKEELLQKIMMNCLDFVEISEAEEQIEILEKIVPDWICKKLVSSGDTMYCVNNAVDLESIRSRLLSNVTKGDE 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01371 123 Pfam DNA replication factor Cdt1 C-terminal domain 29 87 IPR032054 -
Trre12g01371 123 PANTHER DNA REPLICATION FACTOR CDT1 4 115 IPR045173 GO:0003677|GO:0030174|GO:0071163
Trre12g01371 123 Gene3D - 24 121 IPR038090 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01371 Trre-Chr12 13632136 13632879 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01371 31 114 Core DNA Replication Machinery Family AT3G54710 44.048 2.09e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01371 K10727 - gmx:102670055 144.05