Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01366 ATGAAGCCGATGGGTACAGTTACAGGACGGAGGAGTATGTCGATGATATCCAAAACTGTCGCCGAAATAGTCGGAGTCAGCAAAACCAAGACACGCAAAGCTACAAGTGACCTCTGCACTTTCATGGGACTCTTATCATATGGAAAATATACGGCAGCATATAAAATTCAAAAGTATGAAGAATTTGTTGATAAAAGCTTGAAATCTGATCTTCTTCATGCTACTGCTCAGAGGTGTTCGAACAACAGAAAATTTTGTGTCCTTTTTCACTTCTATGTATACCGTGCTGATTTGCGAAGAAACATTGAAAACCTTGAGAAGAATAGTGTAACCAGTCTGAGAACTTTGGTCAATATTGGGTCTTCTCGCCAGCTTGCAGTTGGCCCGGTAGCATTGGTTTCTCTGTTGGTCTCTAATGTTCTAGGCAGTGTAGCTGATTCATTCAGTGAAGTATACATAGAGTTGGCAATTTTACTGGCCCTTATGGTTGGGATACTGGAGTGCATAATGGGACTATTGAGTTCCTTTCTGTAG 534 0.412 MKPMGTVTGRRSMSMISKTVAEIVGVSKTKTRKATSDLCTFMGLLSYGKYTAAYKIQKYEEFVDKSLKSDLLHATAQRCSNNRKFCVLFHFYVYRADLRRNIENLEKNSVTSLRTLVNIGSSRQLAVGPVALVSLLVSNVLGSVADSFSEVYIELAILLALMVGILECIMGLLSSFL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01366 177 Pfam Sulfate permease family 118 173 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01366 Trre-Chr12 13605638 13607857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01366 120 173 Inorganic Solute Cotransporters AT3G12520 75.926 4.12e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01366 K18059 - aew:130763520 85.1149