Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01364 ATGAAAAAGAAAAATGGTGTTCATTCTTCATTTGAGTCCTCAAAGCTCACTCATGATATACATTCATTTGTTTTCCCCTATTTTTCTAGGTGGCAAAATTCTCATGGGAAAGTTTTCATCTATTGGCTAGGGACAGAACCTTTTCTATACATTGCAGACCCTGAATTCTTGAAGAAAATGTCCAAAGAAGTTATAGCAAAGAGATGGGGAAAACCAAATGTATTTAGAAATGATAGAGAGCCTATGTTTGGAAAGGGTTTGGTGATGGCTGAAGGCAATGAATGGGTTCATCATAGGCATGTTATTGCCCCAACATTTTCTCCTCTTAAATTGAAGGCAATGTCAAGCATGATGGTAGAATCTACAAAGAAAATGATGGATAGATGGATTACTCGAATCAACTCGGGAAACCTCGAAATTGATATCGAAAGAGAGATCGTTGCAATCGCAGGAGAGATCATAGCAAGAACAAGCTTTGGTATAAATGATGACAATGCAAGAAAAATTTGTGAAAAATTACGTACCCTACAAATGGCACTTTTCAAGACAACAAGATATGTAGGTGTTCCATATATAAAGTTCATTGACATAAAGAAAACCCTAGAGGCAAAAAAACTTGGGAAGGAAATAGATAAGCTTTTGCTTAGTGTGATTGAAAGTCGAAAGGAATCAAAAGTGAAAAGAAATGGTAGAGAAGATTTGTTGGATTTGTTGTTGCATGAAAATGAAGTTGATGGAAAGTATGGGAAAAGATTGAGCACAAAACAATTGATGGATGAATGCAAGACATTCTTCTTTGCTGGCCATGAGACAACAGCATTGGCTATTTCTTGGACTTTAATGCTTTTAGCTATGCATGAAGATTGGCAAAATCAATTGAGAGATGAGATAAGAGAAGTGGTTGGTGATAAACAAGTTGATATCAATGTGCTTGCTGGTTTCACAAAGATGAAGTGGGTAATGAATGAAGCTCTAAGGCTTTATCCATCAGCACCAAATGTTCAAAGACAAGCTAGAGAAGACATTAAATTTGATAATATAACAATTCCTAATGGGACCAACATGTGGATTGACGTTGTCGCGATGCACCACGACCCATCGTTGTGGGGAGAAAATGTGAATGAGTTTCGACCAGAAAGGTTCATGGGCGACGTAAATGGTGGATGTAACCAAAAATTGGGATACTTACCTTTTGGATTTGGAGGAAGAATGTGTGTTGGTAGAAACTTGAGCTTCATGGAGTATAAGATAGTGTTAACCCTTCTTCTCTCTAGATTTAGTTTTAAAATTTCCCCAACTTATATCCATTCACCTTCTATTATGCTCTCACTAAGGCCAGCTTATGGACTCCCTCTAATAGTCCAATCGCTTTAG 1374 0.3719 MKKKNGVHSSFESSKLTHDIHSFVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSKEVIAKRWGKPNVFRNDREPMFGKGLVMAEGNEWVHHRHVIAPTFSPLKLKAMSSMMVESTKKMMDRWITRINSGNLEIDIEREIVAIAGEIIARTSFGINDDNARKICEKLRTLQMALFKTTRYVGVPYIKFIDIKKTLEAKKLGKEIDKLLLSVIESRKESKVKRNGREDLLDLLLHENEVDGKYGKRLSTKQLMDECKTFFFAGHETTALAISWTLMLLAMHEDWQNQLRDEIREVVGDKQVDINVLAGFTKMKWVMNEALRLYPSAPNVQRQAREDIKFDNITIPNGTNMWIDVVAMHHDPSLWGENVNEFRPERFMGDVNGGCNQKLGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKISPTYIHSPSIMLSLRPAYGLPLIVQSL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01364 457 SUPERFAMILY Cytochrome P450 21 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 Gene3D Cytochrome P450 11 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 448 - -
Trre12g01364 457 PRINTS P450 superfamily signature 319 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PRINTS P450 superfamily signature 267 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PRINTS P450 superfamily signature 396 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PRINTS E-class P450 group I signature 256 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PRINTS E-class P450 group I signature 359 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PRINTS E-class P450 group I signature 395 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PRINTS E-class P450 group I signature 32 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PRINTS E-class P450 group I signature 276 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 PRINTS E-class P450 group I signature 405 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 Pfam Cytochrome P450 25 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01364 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 398 407 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01364 Trre-Chr12 13575943 13579975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01364 7 457 Cytochrome P450 AT5G52400 60.398 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01364 - - gmx:100784128 736.487