Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01354 ATGAAACAATTACGCGTGCTGTCTTTGTCAAACTACAAGAGTATCACTGAGTTACCCAACTCTATTGGAGATTTTTTATACCTGCAGTACTTAAATCTTTCTCACACTAAGATCGAAAAGTTGCCTACTGAAACATGCAAGCTTTACAATCTGCAGTTCTTGTTGTTGGCAGGCTGTAGAAGGCTCATTGAATTGCCAGAAGACATTGGTAGGTTGGTTAATCTTCGCCACATTGATGTTAGCGACACTGCATTGAGGGAGATGCCGGTACAAATAGCCAAACTTGAAAAACTCCAAACTTTGTCTAACTTTATGGTAAGCAAACATAATCATGGATTGAAGCTTGCAGAGCTAGAAAACTTTCCCCACCTACATGGAAAACTTTCTATCTCACAGCTACAAAATGTTAATGACCTCTTTGAAGCAGATGAAGCCAATATGAAGATGAAAGAACAGATAGAAGAGTTAGCTTTAGAATGGGATTGTGGTAGTAATGTTTCAAATTCACAAACTCAAAGTGTTGTACTTGAACATTTGCGACCCTCAACAAAATTGAAAAGTCTCACCATCAAAGGCTACTGTGGAATCAACTTTCCAAATTGGTTGGGTGATTCTTTATTTAGAAACATGGTGTATTTAAGGATCTCAAATTGTGATGATTGTTTATGGCTTCCACCCCTTGGACAATTGGGTAATCTGAAAGAACTCGTTATTGAAGGGATGCAATCAATGGAGACAATTGGTATTGACTTCTATGGAAGTGATAGTTCTTCATTTCAACCATTTCCTTCTTTGGAGACTCTACACTTTGAGGATATGCAAGAGTGGGAGCAATGGAACTGGATTGGAGGTACGGCTACGGAGTTTCCTAGTCTAAAAACCTTGTCACTAAGTAAGTGCCCCAAACTGAGAGTAGAAAACATAGCTGACAAATTTCCTTCCTTAACAAGACTTGAGTTAAGAGAATGTCCTCTATTGGTGCAATCAATGCCATCATTGGATCATGTATTCAACCAAATGATGTTCCCTTTTCATTCTCTTCAACAGTTGACCATAGACGGCTTTCCATCTCTGACGTCTTTCCCAACAGACGGTCTACCAGAAACATTGAAATTTCTCACAATTAGTAATTGTGAGAATCTAGAGTTCCTTCCTCATGAATTATTGCACAATTATACATCGCTCGAGGAATTGAAAATATCTTATAGCTGCAATTCAATGATATCATTTACCTTGGGCGCTCTCCCTGTCCTCAAGAGTTTGTTTATTGAGGGTTGTAAAAATTTGAAATCGATATTAATTGCAGAAGGAGCGTCAGAAAAGAGTCTCTCATTTCTTATAAGCATCAAAATATGGGATTGTAATGAATTGGAGTCATTTCCCCCTGGTGGATTGGCCACTCCAAACCTCGTTTATATTGCATTGTGGAAGTGTGAGAAGCTTCGTTCATTACCTGAAGCAATGAACACTCTAACTGCCCTTCAAGAAATGGAAATTGATAATCTACTAAATCTTCAATCTTTTGTTATAGATGATTTGCCGATCAGTTTAAGGGAATTGACTGTTGGATCTATTGGAGGGATTTTGCGGAATATTGGGCCAACTTGGAAAACTCTCAAATGGCTGTCAGTATTGCGAATTAAAGGTGGTGATATGGTGAACACGTTCGTGGTGTCATTCCTACCTAAATTTCTTGTGACACTATGCATTTGTGGTCTTGATGATAAAAACATTGATTGGAAATGGCTTCAACATCTAACTTCTCTCCAAAACCTTGAGATCGTTAACGCTCCCAAACTCAAGTCGTTGCCAAAAAAAGGATTGCCTTCCTCTCTTTTAGTACTAAGTATGACACACTGTCCATTACTGGAAGCAAGTTTGCGCAGAAAGCAAGGGAAAGAGTGGCGTAAGATTGCTCACATTCCCTCCATAATTATAGATGGCGAATTGATCACATGA 1959 0.3869 MKQLRVLSLSNYKSITELPNSIGDFLYLQYLNLSHTKIEKLPTETCKLYNLQFLLLAGCRRLIELPEDIGRLVNLRHIDVSDTALREMPVQIAKLEKLQTLSNFMVSKHNHGLKLAELENFPHLHGKLSISQLQNVNDLFEADEANMKMKEQIEELALEWDCGSNVSNSQTQSVVLEHLRPSTKLKSLTIKGYCGINFPNWLGDSLFRNMVYLRISNCDDCLWLPPLGQLGNLKELVIEGMQSMETIGIDFYGSDSSSFQPFPSLETLHFEDMQEWEQWNWIGGTATEFPSLKTLSLSKCPKLRVENIADKFPSLTRLELRECPLLVQSMPSLDHVFNQMMFPFHSLQQLTIDGFPSLTSFPTDGLPETLKFLTISNCENLEFLPHELLHNYTSLEELKISYSCNSMISFTLGALPVLKSLFIEGCKNLKSILIAEGASEKSLSFLISIKIWDCNELESFPPGGLATPNLVYIALWKCEKLRSLPEAMNTLTALQEMEIDNLLNLQSFVIDDLPISLRELTVGSIGGILRNIGPTWKTLKWLSVLRIKGGDMVNTFVVSFLPKFLVTLCICGLDDKNIDWKWLQHLTSLQNLEIVNAPKLKSLPKKGLPSSLLVLSMTHCPLLEASLRRKQGKEWRKIAHIPSIIIDGELIT 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01354 652 Gene3D Ribonuclease Inhibitor 1 148 IPR032675 -
Trre12g01354 652 SUPERFAMILY L domain-like 343 623 - -
Trre12g01354 652 Coils Coil 139 159 - -
Trre12g01354 652 SUPERFAMILY L domain-like 2 387 - -
Trre12g01354 652 Gene3D Ribonuclease Inhibitor 436 637 IPR032675 -
Trre12g01354 652 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 442 623 - -
Trre12g01354 652 Gene3D Ribonuclease Inhibitor 307 404 IPR032675 -
Trre12g01354 652 Gene3D Ribonuclease Inhibitor 149 306 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01354 Trre-Chr12 13456071 13458029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01354 15 110 WRKY Transcription Factor Family AT4G12020 36.082 4.66e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01354 - - tpra:123913251 1032.32