Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01276 ATGTCCAGAAAAATTTCGGATGCTTCTGGAGAAAACCTTAGCATTATGCTATGTGTTGCGACATCTGTTTGGATGCCGGTGTCGCGGCAAAGGGTGTTTGACTTCCTCCGCGGTGCACGCTTGCGAGGTGAATGGGATCTTTTGTCTAGTGGTGGAACAATGCAGGAAATGGTCCACATTGCTATAGGAGGACTTGGAAATTCGGTTTCTATCATTATCGCTGATAATGTTGCGAATGGAAACGAGGGGCTATATCTCGAAGATTCATGGATCGATAGTTCTAGTTCGATGGCATTTCAGATTCATGAACATAATGGAAAAAAGAGTACTTACAGTATCGCTAATGATGGGAATTTGATTATACTTTTCAGATGCATGCTGAGATTCAATTGCCTTCTCCGTTGGTTCCGGTTCGAGAATATAATTTCATCAAGTTTTGCAACCAGTATGCTGAAGGTAAGTGGGTTATGGCTGATGTTTCGTTCGACTATGGTTGTAATGGTGCCAACGGGAACCCTAACATGA 525 0.4286 MSRKISDASGENLSIMLCVATSVWMPVSRQRVFDFLRGARLRGEWDLLSSGGTMQEMVHIAIGGLGNSVSIIIADNVANGNEGLYLEDSWIDSSSSMAFQIHEHNGKKSTYSIANDGNLIILFRCMLRFNCLLRWFRFENIISSSFATSMLKVSGLWLMFRSTMVVMVPTGTLT 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01276 174 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 98 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01276 Trre-Chr12 12733587 12734218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01276 1 97 Homeobox Transcription Factor Family AT3G61150 49.495 1.01e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01276 K09338 - tpra:123904787 108.997