Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01275 ATGGCTGAACCAAACTCTGATCTCTGGATCAAGAGTTTGGAGAGTGGGAAGGAAGAGTTTAACCACGACCAGTATGAAAGGATTCGTTCTCCTTTTAATACTCTGAAACCAAATTGTTTTGTAGCTGAAGCTACAAGAGAGAGTGTGCTATTATGCATCAACGCTGCTGCACTCATAGAAACATTCCTGGATGCGGATCGGTGGGCGGAGATGTTTCCGTGTATGATTGTTGAAGCTGAAACTTTGGATGTATTTTCTAATGGAATTGACGGAACAAAAAATGGACCTATACAACTAATTGAAGTTGGAACTGATTGGGAATTTGATTATACTTTTCTGATGCATGTTGAGATTCAATTGCCTTCTCCATTGGTACCGGATCGAGAATATAATTTCATCAGGTTTTGCAAGCAGTATGCTGAAGGTAAATGGGTTATGGCTGATTTTTGGTTCGAGTATGGTTGTAATGTTGCCAACGGGAACCTTAACATGAGCTGCGAAAACCATTAG 510 0.4039 MAEPNSDLWIKSLESGKEEFNHDQYERIRSPFNTLKPNCFVAEATRESVLLCINAAALIETFLDADRWAEMFPCMIVEAETLDVFSNGIDGTKNGPIQLIEVGTDWEFDYTFLMHVEIQLPSPLVPDREYNFIRFCKQYAEGKWVMADFWFEYGCNVANGNLNMSCENH 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01275 169 ProSiteProfiles START domain profile. 1 148 IPR002913 GO:0008289
Trre12g01275 169 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 152 IPR042160 -
Trre12g01275 169 Pfam START domain 5 148 IPR002913 GO:0008289
Trre12g01275 169 SUPERFAMILY Bet v1-like 44 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01275 Trre-Chr12 12732645 12733531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01275 1 148 Homeobox Transcription Factor Family AT4G00730 43.919 7.28e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01275 K09338 - tpra:123905936 200.675