Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01272 ATGAATGTTTACTCTCCCATCAACATGCAGTCCTTGAACTTGGTGATGTCTGGAGGAGATTCTTCATTTGTTGCTCTTTTGCCTTCCGGCTTTTCAATTCTTCCGGATGGCTATTCGAGTAACAACAGCAATGGAACTTCAAGTGATGGTAGCAGCAGTAGCGGCAGCGACAATGTCGGATGCTTACTCACGTTTGGATTGAAAATGTTGCTGTACAACCATCCATCAAGTAAGCTGACAACTGAATCGATTGATACTGTCAATAACCACATTGCGACCACCATCCAGAAGGTCAAAGACGTTATCGGAGTTGCTTGA 318 0.4403 MNVYSPINMQSLNLVMSGGDSSFVALLPSGFSILPDGYSSNNSNGTSSDGSSSSGSDNVGCLLTFGLKMLLYNHPSSKLTTESIDTVNNHIATTIQKVKDVIGVA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01272 105 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 101 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01272 Trre-Chr12 12713805 12714122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01272 3 104 Homeobox Transcription Factor Family AT5G52170 50.980 3.04e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01272 K09338 - tpra:123904787 106.301