Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01271 ATGGATTTTGGCAGTGCTCGTCCTGCAAGGAGGCATATTAGCTCCAGATCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGATCCCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGACGAGAGGACTGACATTTGGTCACTAGGATGCACATTATATGCAATAATGTGCTAG 201 0.4925 MDFGSARPARRHISSRSEALQLQEWASEHCSAPFRSPELWDCPSHADIDERTDIWSLGCTLYAIMC 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01271 66 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
Trre12g01271 66 ProSiteProfiles Protein kinase domain profile. 1 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre12g01271 66 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 65 - -
Trre12g01271 66 SUPERFAMILY Protein kinase-like (PK-like) 2 66 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01271 Trre-Chr12 12711892 12712822 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Trre12g01271 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01271 K08856 - qsu:112003904 136.346