Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01263 ATGGCAAATCCGACGTCCAGCAACTGTGGCGGCCCAACAATGTCACCGGAAGAACAAGAGATTAGAGCCGAGAATGCTCGATTGAAAGAGGAATTGGCCCGAGTGTGTGCCTTGGCCAAAAAGTTCCTCGATAGACCACTCTTTGATTTAACTGCAATGTTGCCGCCGATGGGAGATGGAGTTATGGAAACAACACCATCTTCTGAAATGATTCAAAAAAAAAGATCTAAGCTTATAGATCTTTCGTCTACTGCTATGGATGAACTCATAAAGATGGTTGAACCCGATTTCCATCTATGGGTTAAGAGTCCGGAGAGTGGGAAAGAAAAGCTTAACCTTGACTAG 345 0.4435 MANPTSSNCGGPTMSPEEQEIRAENARLKEELARVCALAKKFLDRPLFDLTAMLPPMGDGVMETTPSSEMIQKKRSKLIDLSSTAMDELIKMVEPDFHLWVKSPESGKEKLNLD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01263 114 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 114 IPR042160 -
Trre12g01263 114 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01263 Trre-Chr12 12615520 12615864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01263 1 112 Homeobox Transcription Factor Family AT3G61150 36.943 1.01e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01263 K09338 - gmx:100820113 100.908