Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01262 ATGCCAGTACCGTCACTTGAAGATCTGGTGATGGTGTTGTTATTTGAATGGCCATCCGGAAGAATTGAAAAGCTGGAAGGCAACAAAGCAATACACAGAGAATACACGACCATCGAGCCAAAACTATTGGTTCCGGTCCGAGATTCTTCATGTGTTGCTTTGTTGCCTTCCGGCTTTTCAATTCTTCCGGATGGCCATTCAAATAACAACACCATCACCGGATCTTCAAGTGACGGTAGTGGCATCGGTGGTAACTCTGGGTACTTTCTCGCAGTTGGAATGCAAATGTTGTTGAACGACCTTCAAACAAGCAAGCTAACAACTGAATCAGTTGATACAATTAATGAACTAATCTCATGCACCATTTAG 369 0.4336 MPVPSLEDLVMVLLFEWPSGRIEKLEGNKAIHREYTTIEPKLLVPVRDSSCVALLPSGFSILPDGHSNNNTITGSSSDGSGIGGNSGYFLAVGMQMLLNDLQTSKLTTESVDTINELISCTI 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01262 122 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 47 122 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01262 Trre-Chr12 12614692 12615060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01262 48 122 Homeobox Transcription Factor Family AT3G61150 48.718 1.58e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01262 K09338 - gmx:100794400 81.2629