Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01246 ATGTCTATTTGGCCAGAGAAAAAAATGGGATTTAACTCTATGGCTAAGGAGATTAAAACTGTACAATTGACAATGTTTTATAATGGAGAAGTTATTGTGTTGGATGATTTTCTTGATGACAAAGTAATTACTTCCAAATTACCATATTCTATACCAAACAAGCAATCCATCTCAGCTTCAGTAAAGCCTGCTGAATCCATTCCATGGCTTGTGTTAGGTACTAAATCAATGTAA 234 0.3333 MSIWPEKKMGFNSMAKEIKTVQLTMFYNGEVIVLDDFLDDKVITSKLPYSIPNKQSISASVKPAESIPWLVLGTKSM 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01246 77 ProSiteProfiles Tify domain profile. 16 51 IPR010399 -
Trre12g01246 77 Pfam tify domain 21 42 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01246 Trre-Chr12 12487754 12489035 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Trre12g01246 tify 4.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01246 - K12567 gmx:100778169 41.9726