Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01200 ATGGCTGCCCGAGCACACGATGTTGCTGCAATGGCATTGAGGGGCCGCTATGCCTGTCTCAATTTCGCCGACTCAGTGTGGCGTCTCCCTATTCCTACAACCTCTAATACAAAAGATAGTCAAAAGGCGGCTACTGAAGCCGCCGAGGCCTTTAGACCAGACAAGACTTTAATGAATAATGACATTGACACTGTTGTAGCTGTAGTCGCTGCAGAGGAGTTGATTGTAGCTGTTGTCGCCGCCGAGGAGCTGAATTTTCAAGATGATGAGGATTTAAAAAATATGTCTGTTACAATCCCTCGGGTTGTGACTGCAATTGGAGTCGCATTCGTCGCCGCATTTCACCATAATATCAAGAATTGTGATTGTAGCACTCCAGAACGCACCTACTGCCAGGCCAGCAGCAATCCTCGCAAGCATTCTAGAACCTTTGCAATGGTTTCAGTTTTTGAAGTTTGA 459 0.4706 MAARAHDVAAMALRGRYACLNFADSVWRLPIPTTSNTKDSQKAATEAAEAFRPDKTLMNNDIDTVVAVVAAEELIVAVVAAEELNFQDDEDLKNMSVTIPRVVTAIGVAFVAAFHHNIKNCDCSTPERTYCQASSNPRKHSRTFAMVSVFEV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01200 152 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 95 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01200 Trre-Chr12 11933446 11936434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01200 1 95 AP2-EREBP Transcription Factor Family AT5G51990 51.515 7.08e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01200 - K09286 mtr:25497241 124.79