Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01134 ATGGAAGACCCAAAACAAGATACCCAAATGGAAATTGAAGCAGAAAAATCACCCCTTTTAGAAAAAAACTATATTCCTCAAGTTTTGTCACAAAAAATGGAAGAGAAAATGAAAAGGAAAAAGTCAGAGAGGTTTACTTATCTTATTGCAGCGGTTATGTCTAGTCTTGGTATAACATCTATGGCTGTGTTGGCTGTTTATTATAGATTTTCATGGCAAATGGAGGGTAGTGGAGAAATTCCATGGTCAGAAATGTTTGGTACATTTGCTCTATCAGTGGGTGCTGCTGTGGGAATGGAGTTTTGGGCTAGATGGGCTCACAAAGCTCTTTGGCATGCTTCCTTATGGCACATGCATGAGTCCCATCATAGAGCAAGAGAAGGAGCTTTTGAATTAAATGATGTATTTGCAATAATCAATGCTGTCCCTGCAATCGCTCTCCTTAACTTTGGTTTCTTCCACAAAGGTCTCATCCCTGGTCTTTGCTTCGGTGCGGGTCTTGGGATTACGGTGTTTGGGATGGCCTACATGTTTGTACATGACGGATTGGTTCATAAGAGATTCTCAGTGGGACCCATTGCCAACGTACCCTATTTCAGAAGGGTAGCTGCTGCCCACAAACTTCACCATTCAGACAAATTTGATGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAACTTGAAGAGGTGGGAGGACTAGAAGAGCTTGAAAAAGAGATAAGTAGGAGGACAAAATCATACAATAATAGTTCATGA 759 0.4163 MEDPKQDTQMEIEAEKSPLLEKNYIPQVLSQKMEEKMKRKKSERFTYLIAAVMSSLGITSMAVLAVYYRFSWQMEGSGEIPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRAREGAFELNDVFAIINAVPAIALLNFGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFSVGPIANVPYFRRVAAAHKLHHSDKFDGVPYGLFLGPKELEEVGGLEELEKEISRRTKSYNNSS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01134 252 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 15 248 IPR045019 GO:0016491
Trre12g01134 252 Pfam Fatty acid hydroxylase 95 222 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01134 Trre-Chr12 11154930 11158294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01134 1 165 Chloroplast and Mitochondria Gene Families AT4G25700 68.675 1.82e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01134 K15746 - pvy:116107134 414.461