Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01133 ATGGCGGCAGGACTAACCGCCACAATAACCTTACAACCCTTAAACCGTCACTATAAACCTTTGTTTCCTCATCTTCAAAAACCAACACCAACACTTATTTTTTCCCCTTTAAGATGTTTTTTACATCGAAGAACGACCTTAAAAACTCAAAGATTGAAAAACTTCACTCTTTGTGTTCTCATGGAAGACCCAAAACAAGATACCCAAATGGAAATTGAAGCAGAAAAATCACCCCTTTTAGAAAAAAACTATATTCCTCAAGTTTTGTCACAAAAAATGGAAGAGAAAATGAAAAGGAAAAAGTCAGAGAGGTTTACTTATCTTATTGCAGCGGTTATGTCTAGTCTTGGTATAACATCTATGGCTGTGTTGGCTGTTTATTATAGATTTTCATGGCAAATGGAGGGTAGTGGAGAAATTCCATGGTCAGAAATGTTTGGTACATTTGCTCTATCAGTGGGTGCTGCTGTGGGAATGGAGTTTTGGGCTAGATGGGCTCACAAAGCTCTTTGGCATGCTTCCTTATGGCACATGCATGAGTCCCATCATAGAGCAAGAGAAGGAGCTTTTGAATTAAATGATGTATTTGCAATAATCAATGCTGTCCCTGCAATCGCTCTCCTTAACTTTGGTTTCTTCCACAAAGGTCTCATCCCTGGTCTTTGCTTCGGTGCGGGTCTTGGGATTACGGTGTTTGGGATGGCCTACATGTTTGTACATGACGGATTGGTTCATAAGAGATTCTCAGTGGGACCCATTGCCAACGTACCCTATTTCAGAAGGGTAGCTGCTGCCCACAAACTTCACCATTCAGACAAATTTGATGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAACTTGAAGAGGTGGGAGGACTAGAAGAGCTTGAAAAAGAGATAAGTAGGAGGACAAAATCATACAATAATAGTTCATGA 939 0.4079 MAAGLTATITLQPLNRHYKPLFPHLQKPTPTLIFSPLRCFLHRRTTLKTQRLKNFTLCVLMEDPKQDTQMEIEAEKSPLLEKNYIPQVLSQKMEEKMKRKKSERFTYLIAAVMSSLGITSMAVLAVYYRFSWQMEGSGEIPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRAREGAFELNDVFAIINAVPAIALLNFGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFSVGPIANVPYFRRVAAAHKLHHSDKFDGVPYGLFLGPKELEEVGGLEELEKEISRRTKSYNNSS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01133 312 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 308 IPR045019 GO:0016491
Trre12g01133 312 Pfam Fatty acid hydroxylase 155 282 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01133 Trre-Chr12 11154750 11158294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01133 1 225 Chloroplast and Mitochondria Gene Families AT4G25700 57.895 8.63e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01133 K15746 - gmx:100813368 455.292