Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01106 ATGGCCATTGTTTTACCTTTAGTTGGAGCTTTGATACAACAACTGGCACCTTATGTCAAAGAAGAGTATGCAACATTTAAAGATGTTAACAAACATGCTGAAAAGCTATCAAGTAATCTCACTGCTATTCATGCTGTCCTACAAGATGCTGAGGAAAAGCAAATCACAAGTCGTGTTGTCAAAGATTGGCTGCAAAAGTTGACTGATGCAGCACATATTCTTGATGATATATTGGACAGAAGTTCAATACTTTCTGAAGCAAACAGAGACAACATCACCATCCTCCACCCTAAGATGCTATTTGTTCGTCGTAGCATTGGCAAGAAGATGAAGAAGGTTGCTAAAAGGATCCATGAGATTGCTGAAGAAAGGGTCCATTTTGGATTACAATCAGGAATCGTGGAGCACCGTCTTGTTGATGATCAATGGCGCCAAACTACCTCTGGTGTCACTGAATCCCAAATTCATGGAAGAGATAAGGATAGGGAAAAGGTTGTTGACTTTCTTCTCAAGGAAGCTTGTGACAGGGAAGAACTCTCTGTCTATTCCATTGTTGGACATGGCGGATATGGAAAAACAACACTTGCTCAACTGGTCTTCAATGATAAAAGGGTACACACCCATTTTGATTTGAAAATATGGGTTTGTGTTTCTGATGATTTTAATTTGATGAAACTTTTCCGGTCCATCATAGAAAACATAGAGGGAAAAAATCCAGATCTCAATTCTTTAGAATCAATGCAAAAAAAGGTTCAACAAGTTTTGCAAAACAAAAGGTATTTGCTTGTCCTTGATGATGTTTGGAGTGAAGATCCAGAGAAATGGAGCATGTTCAAGTATCCGTTGCAAAATGGATCAAAAGGTGCATCAATTTTAGTCACTACACGACTTGAGACTGTTGCAAACATCGAGGGACTGGGAACTCATCCTGCTCATCATTTGGAAGGTTTATTAGATGATGACATTTGGTCATTGTTTAGACAACAAGCTTGGTCATTGTTTGGACCAAACGGGGAAGAGCGTGCAGAGCTTGCAAAGATTGGAAAGCATATTATGAGAAAATGTAATGGTTCGCCTCTTGCAGCCAAAGCACTAGGAAGCCTTTTGCGCTTTAAAACTGACGAACACCAATGGGATTCTATAGACAAAAGTGAGATTTGGACGATATATGATGATGCTACCAAGTCTGCTTTAACACTGAGCTACTACAATCTAAAATTAGTGTTGAGGCCATGTTTCACTTTTTGTGCTATATTTCCTAAAGATTTTGAAATGGTGAAGGAAGATCTAATTCATCTTTGGATGGCCAATGGATTGATTTCGTCCGGAGGAAATTTAGAGGTGGAGCATGTTGGCAATGAGATGTGGAGTGAACTATACCAGAGATCATTTTTTCAAGAAGTCAAAACTGATGATGAAGGTATAGTTACGTTCAAAATGCATGATATATTCCATGATATTGCTAGCTCCATTATGGGAGAACAATGCTTAGCTTTAGAAACTGCTAGCTTGACTACTTTGTCAAAAAGAGTTCATCATATTGGTTGTTTTAATGTTCATGAGCAATCCAAATACAACTTGATTCCATTCAAAATAGCTGAATCCTTGCGGACTGTTCTTCGATTTTATCTGTCTAAATCAAGTTTAAGTGTGTTTCCATCAATCACTCCTCTCCGAGCATTAAGTACAAACAACTGTTTTCAACTCTCAACCTTGAAGAATTTTATCCATTTGAGGTACTTTGAACTTTACAGAAGTTACATTAAAACTCTGCCCGAGTCTATTTGTAGCCTAAGAAAATTACAAACACTAAAACTTGTCCATTGTCTCAATCTTATTAGTCTTCCCAAACAATTGACACAACTACAAGATCTCAGACATCTCGTGATTAAAGAGTGTGACTCATTAAGATCAATGCCTTTTAATATTGGTAGGTTAACTCATTTGAGAACATTGAACTTGTTGATTGTGGATTCGAATACTGGGTTTGGTTTAGCAGAGCTACGTAACTTACGACTAGGAGGCAAGCTACACATCAAACGCCTTCAGAATGTGTCGAATGAAACTGATACTAGAGAAGCTAATTTAATTGGTAAGAAGGAGTTAAGTAAGTTAAACTTGTCATGGGGTATTGATGTTAATTCACAAGTTAGTGTTACTAGCGCTGAGCAAGTTCTTGAAGCCCTTGAGCCTCATACAGGTCTCAAATATTTTGGGATGAATGGTTATAACGGAATAAATATCCCAAATTGGATGAGAAATACTTCTATTTTGGAAGGTTTGGTTGATGTTAAATTTTTCGAATGCAGAAATTGTGAGCGGCTTCCTCCACTTGGTAAATTACCATGTTTAACAACTCTTCATGTGTCTGGAATGAGTGAATTGAAGTACATTGATGATGACTTGTATGAAGGTGAGAACAAGAAGGCTTTCCCATCATTAGAGAAAATGACGTTATCTGATTTACCAAATTTAGAGAGGGTGTTAAAAGCTGAAGGAATAGAGATTGTATCACAACTTTCTGACTTTAGCATAACGGGGACCCCTAAGCTTGCATTTCCATCCCTTCCATCCATTGAGACTTTTCATGCTAGAGGGAATACTAAAAGAGATTCCATTGATGGTGGTGCATCTTTCCTGAGGGGAATTGCAGCTATTATGCATAATCTCAAAAAACTTGAGATTAATCACTTTGATGAACTCAAGGTACTGCCTAATGAACTCAACTCTCTCAGTTCCCTAAAACAACTACACATTAAATGTTGTGATAAGCTTGAGTCTATCCCCGAGTGTGTACTTCAAGATTTGAGTTCTCTTCAAGTTTTGGAATTTGCATGGTGCAGTAGCTTAAAATCCTTGCCGGAAGGTACAAACCTGACTTCTCTTCAAAGATTAGATATCTTTGATTGTCCCAAATTAAGCTCATTACCAGACTGGTTGGGGACCATGACTTCTCTTCAAACATTACAAATCAGTTGGTGTCCCAAATTAACCTCATTACCAGATGGCTTTAAAGAACTCATAAACTTGCATGAATTAACTATTTATGGATGTCCTAAGCTGAAGAAGCGATGCAAGAAAGAAACAGGGGAAGACTGGCATAAGATAGCTCATGTACCAAAATGGATGGTGGGATCTTACGGTAATGAGGAATGA 3156 0.3793 MAIVLPLVGALIQQLAPYVKEEYATFKDVNKHAEKLSSNLTAIHAVLQDAEEKQITSRVVKDWLQKLTDAAHILDDILDRSSILSEANRDNITILHPKMLFVRRSIGKKMKKVAKRIHEIAEERVHFGLQSGIVEHRLVDDQWRQTTSGVTESQIHGRDKDREKVVDFLLKEACDREELSVYSIVGHGGYGKTTLAQLVFNDKRVHTHFDLKIWVCVSDDFNLMKLFRSIIENIEGKNPDLNSLESMQKKVQQVLQNKRYLLVLDDVWSEDPEKWSMFKYPLQNGSKGASILVTTRLETVANIEGLGTHPAHHLEGLLDDDIWSLFRQQAWSLFGPNGEERAELAKIGKHIMRKCNGSPLAAKALGSLLRFKTDEHQWDSIDKSEIWTIYDDATKSALTLSYYNLKLVLRPCFTFCAIFPKDFEMVKEDLIHLWMANGLISSGGNLEVEHVGNEMWSELYQRSFFQEVKTDDEGIVTFKMHDIFHDIASSIMGEQCLALETASLTTLSKRVHHIGCFNVHEQSKYNLIPFKIAESLRTVLRFYLSKSSLSVFPSITPLRALSTNNCFQLSTLKNFIHLRYFELYRSYIKTLPESICSLRKLQTLKLVHCLNLISLPKQLTQLQDLRHLVIKECDSLRSMPFNIGRLTHLRTLNLLIVDSNTGFGLAELRNLRLGGKLHIKRLQNVSNETDTREANLIGKKELSKLNLSWGIDVNSQVSVTSAEQVLEALEPHTGLKYFGMNGYNGINIPNWMRNTSILEGLVDVKFFECRNCERLPPLGKLPCLTTLHVSGMSELKYIDDDLYEGENKKAFPSLEKMTLSDLPNLERVLKAEGIEIVSQLSDFSITGTPKLAFPSLPSIETFHARGNTKRDSIDGGASFLRGIAAIMHNLKKLEINHFDELKVLPNELNSLSSLKQLHIKCCDKLESIPECVLQDLSSLQVLEFAWCSSLKSLPEGTNLTSLQRLDIFDCPKLSSLPDWLGTMTSLQTLQISWCPKLTSLPDGFKELINLHELTIYGCPKLKKRCKKETGEDWHKIAHVPKWMVGSYGNEE 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01106 1051 FunFam Probable disease resistance protein At1g61300 138 307 - -
Trre12g01106 1051 Coils Coil 33 53 - -
Trre12g01106 1051 Gene3D - 401 490 IPR036388 -
Trre12g01106 1051 Gene3D - 8 123 - -
Trre12g01106 1051 Pfam NB-ARC domain 159 383 IPR002182 GO:0043531
Trre12g01106 1051 Pfam Rx N-terminal domain 7 89 IPR041118 -
Trre12g01106 1051 Gene3D - 317 400 IPR042197 -
Trre12g01106 1051 PANTHER DISEASE RESISTANCE PROTEIN RP 35 819 IPR044974 GO:0006952
Trre12g01106 1051 Gene3D - 140 305 IPR027417 -
Trre12g01106 1051 FunFam Probable disease resistance protein At1g63360 402 490 - -
Trre12g01106 1051 CDD RX-CC_like 11 122 IPR038005 -
Trre12g01106 1051 PRINTS Disease resistance protein signature 934 950 - -
Trre12g01106 1051 PRINTS Disease resistance protein signature 254 268 - -
Trre12g01106 1051 PRINTS Disease resistance protein signature 181 196 - -
Trre12g01106 1051 PRINTS Disease resistance protein signature 355 369 - -
Trre12g01106 1051 SUPERFAMILY L domain-like 840 1021 - -
Trre12g01106 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 416 IPR027417 -
Trre12g01106 1051 SUPERFAMILY L domain-like 479 865 - -
Trre12g01106 1051 Gene3D Ribonuclease Inhibitor 839 1041 IPR032675 -
Trre12g01106 1051 Gene3D Ribonuclease Inhibitor 523 838 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01106 Trre-Chr12 10946836 10949991 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01106 887 1007 WRKY Transcription Factor Family AT4G12020 28.313 1.80e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01106 - - mtr:25496493 1078.16