Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01087 ATGGCCCGCCCCAACATTTTTAATTTTTTTTTTCATGGGATTATGGCCAACCAAGGTTTCTACTTGCTTGGGTTGGACAATACATCTCCAACTTTTGCATCAGCAATTCAAAACTCTGTTCCAGCCATTACATTTCTCATGGAAGTCATACTCGTAATAGAACATCATGGCAGTCATACTCATAATTATAGAACAAGCGAGGTTGAACAAAAAGGATGGAATAGGGAAGTGGCAGGAACATTGTTCTGTGTTTTAGGGGCATTCGTGATTACATTTTATAAAGATTCAGCAATATACAGTCCAGTTCCACCACTCCACAATCATAATTTAATTGAATAA 339 0.3746 MARPNIFNFFFHGIMANQGFYLLGLDNTSPTFASAIQNSVPAITFLMEVILVIEHHGSHTHNYRTSEVEQKGWNREVAGTLFCVLGAFVITFYKDSAIYSPVPPLHNHNLIE 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01087 112 PANTHER WAT1-RELATED PROTEIN 8 96 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01087 Trre-Chr12 10786823 10787431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01087 6 110 Nodulin-like Gene Family AT1G75500 51.852 9.30e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01087 - - gmx:100786714 114.005