Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01075 ATGGCAAGAATTAGTGGAAGTAAATCTTCTTCATTGTTTTTTATTTCTTTTCTATTAGCTTCTTTAGTCCTTGTTTCCTCTAAGGGACTAGCAAGACCTCCTCCCATTGTGAGGGGACTAGATTGGAATTATTATTTGTTGTCATGTCCTAGGGTTGAAAGGATTGTGAGAAAACATCTTGAAGATGTGTTTGAAAAAGATAGTGGAGTAGCTCCCGGTATACTCCGTCTCTTCTTTCATGACTGCTTTTCTCAGGGATGTGATGCATCAATTTTGTTGAACGTTGCTGATGGAAAAAATGAAACTGAAAGAGATCACCCTGCCAACTTTGGCTTAAGGGATGAAGCTATTCAGACCATTGAAAACCTCCGTGCTCTTATTCGTGGGCAGTGCCCACGTGTTGTCTCATGCGCAGACATCCTAGTCATCGCGGCACGCGAAGCTGTTCGCCAATTTGGAGGCCCAGATTTTGATGTACCATTGGGAAGAAAAGACAACCCAGAGTATGATGAAGATTCACCAGAGAATCTGCCAGTACCATTTAAAAGAACTGATGAACAATTAAGTGATTTTTTTGAACCAAAAAAATTTGATGCCACAGATTTAGTTGCTTTATCTGGGGCACACACTTTTGGTAGAGCACATTGTCTTACATTATTCAATAGAACCACTGATCCAAGCCCACCAATTGATCCAGATTTCAAGAATCAACTTGTAGCTACATGCCCTGAGGACAAACAATTTATTAACACTGTTAATTTGGATATTAGAACACCAACAAAATTTGATAACATGTATTACATTAATCTTTTGAATCATCAAGGTGTGTTTACATCTGATCAAGATTTGGCTAGTCATCCTAAGACTAAGGAGATTGTGAACCGGTTTGCTTCTAACCAAAAAGAGTTTTTTGACAAATTTGCTAATGCTTTTGTTAAGGTTAGTCAATTGGATGTTTTGACCGGAAATCAAGGAGAAGTTCGTAAGTCGTGTTTTGCTCCGAATAAAAAGAAATTTAATGTCGCATCTATGGTGGAAGAGGTCGTGGGAATTGCAGCAAACATGTAG 1068 0.3876 MARISGSKSSSLFFISFLLASLVLVSSKGLARPPPIVRGLDWNYYLLSCPRVERIVRKHLEDVFEKDSGVAPGILRLFFHDCFSQGCDASILLNVADGKNETERDHPANFGLRDEAIQTIENLRALIRGQCPRVVSCADILVIAAREAVRQFGGPDFDVPLGRKDNPEYDEDSPENLPVPFKRTDEQLSDFFEPKKFDATDLVALSGAHTFGRAHCLTLFNRTTDPSPPIDPDFKNQLVATCPEDKQFINTVNLDIRTPTKFDNMYYINLLNHQGVFTSDQDLASHPKTKEIVNRFASNQKEFFDKFANAFVKVSQLDVLTGNQGEVRKSCFAPNKKKFNVASMVEEVVGIAANM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01075 355 Pfam Peroxidase 56 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 ProSiteProfiles Plant heme peroxidase family profile. 39 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 MobiDBLite consensus disorder prediction 160 180 - -
Trre12g01075 355 FunFam Peroxidase 178 314 - -
Trre12g01075 355 MobiDBLite consensus disorder prediction 161 179 - -
Trre12g01075 355 FunFam Peroxidase 43 187 - -
Trre12g01075 355 Gene3D Peroxidase, domain 2 179 315 - -
Trre12g01075 355 SUPERFAMILY Heme-dependent peroxidases 39 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 Gene3D - 43 331 - -
Trre12g01075 355 CDD secretory_peroxidase 39 333 IPR033905 GO:0004601|GO:0042744
Trre12g01075 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Trre12g01075 355 PANTHER - 28 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre12g01075 355 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01075 Trre-Chr12 10666145 10669095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01075 12 355 Peroxidase AT1G71695 45.429 2.69e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01075 K00430 - gmx:100795412 435.647