Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre12g01065 | ATGGATTTCTCTCAAAACACAATTGCAATTCTTCTCCTTTCAACAATCATTTTCTTCATAATTTTATTCCTTCACTCCAAATCCAAGAAAACCAAACAGCCCCCAATGGTTCCTGGTGCATGGCCAATAATTGGCCACCTTCCTCTCTTAAGCAAATCTCAAGCAACTCATCATCTTTTTGGTGCCATGGCTGACAAGCATGGTCCTCTTTTCACCATCAAAATCGGCACAGCAACAACTCTTGTGATCAATAATTGGGAAACCGCGAAAGAATGCTATACAACGAACGATACTGCTGTGTCCTATCGTCCAAACCTCGTTGCATTCGAACACATGACATATAATCATGCCATGGTTGGTTTTGCACCTTACGGTCCCTTTTGGCGCGAAATGAGGAAAATTGTTACGTTAAGTTTTCTCTCAAATCATAGAATCGATCTATTAACTCACGTTCGTGTATCTGAAGTTCAAACTTCGATCAGAGAACTTTTCAGTTCTTGGAAAAATAAAAAAGACGAAAACGGATATTTATTAGTTGAGATGAAGAAGTGGTTTCATGAGTTGGCTTTTAATACCGCGCTTCGAATGGTTGCTGGGAAGAGATATTTTGGTGAGAGTGTGATGGTGAAAGAAGAAGAAGCGAATCGATGTTTGAATGCTTTGAGAGAATATATGCGTTTGATTGGTGTTTTTCCTATTGCTGATGCTGTTCCATTTTTAAGGTTGTTCGATTTTGGTGGACATGAGAAGAATATGAAGGAAAATTTTAAGGAATTGGATGCTGTTGTGGCAGAGTGGTTGGATGAGCATAAGAAGAAGAAGGTTGATGATAAGAGTAAAGAAGATCAAGATTTTATGGATGTGATGCTTTCTACAATTGATGGAAGAAATATTCATGGATTTGATTCAGATACTGTCATCAAAGCCACAGCTCTGGCACTAGTTTTGGGAGCAACAGACACTAGCAGTGTTACACACATATGGGCATTATGCTTATTATTGAACAATCCTCATGCACTTAAAAAAGTTAAAGAAGAAATCGATCTCCACATCGGCAAAGAGCGATTGTGCATTACTGAATCAGATATAAATAAGTTGGTATACCTTCAAGCCGTTGTCAAAGAAACACTAAGGTTGTATCCAGCATCACCACTCTCAGGAATTCGTGAATTTAGAGAAGATTGCAAAATTGGTGGCTACCATGTGAAGAAAGGAACTCGACTATTCACGAACTTATGGAAGATCCAAACCGACCCTAGTGTTTGGTCGGATCCATTGGAGTTCAAGCCTGAGAGGTTTCTTACTACTCATAAAGATGTTGATGTTAAGGGTCAGCATTTTGAGTTCTTACCATTCGGAAGCGGAAGAAGGATTTGTCCTGGAATATCTTTCGGCCTTCGAAGTGCTTATTTGACTCTTGCAAATTTTCTTCACTCTTTTGAAGTCTTGAAAACTTCTGATGAGCCTATTGATATGACTGCTGTTGTGGAAACAACCAACATCAAAGTTACTCCTCTTGAAGTTCTCATCAAGCCTCGTTTGTCTCCCGATTATTATGAAACCATGTAA | 1569 | 0.3901 | MDFSQNTIAILLLSTIIFFIILFLHSKSKKTKQPPMVPGAWPIIGHLPLLSKSQATHHLFGAMADKHGPLFTIKIGTATTLVINNWETAKECYTTNDTAVSYRPNLVAFEHMTYNHAMVGFAPYGPFWREMRKIVTLSFLSNHRIDLLTHVRVSEVQTSIRELFSSWKNKKDENGYLLVEMKKWFHELAFNTALRMVAGKRYFGESVMVKEEEANRCLNALREYMRLIGVFPIADAVPFLRLFDFGGHEKNMKENFKELDAVVAEWLDEHKKKKVDDKSKEDQDFMDVMLSTIDGRNIHGFDSDTVIKATALALVLGATDTSSVTHIWALCLLLNNPHALKKVKEEIDLHIGKERLCITESDINKLVYLQAVVKETLRLYPASPLSGIREFREDCKIGGYHVKKGTRLFTNLWKIQTDPSVWSDPLEFKPERFLTTHKDVDVKGQHFEFLPFGSGRRICPGISFGLRSAYLTLANFLHSFEVLKTSDEPIDMTAVVETTNIKVTPLEVLIKPRLSPDYYETM | 522 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre12g01065 | 522 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | E-class P450 group I signature | 306 | 323 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | E-class P450 group I signature | 411 | 435 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | E-class P450 group I signature | 188 | 206 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | E-class P450 group I signature | 326 | 352 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | E-class P450 group I signature | 370 | 388 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | CDD | CYP82 | 68 | 513 | - | - | |
Trre12g01065 | 522 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | P450 superfamily signature | 317 | 334 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | PRINTS | P450 superfamily signature | 371 | 382 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | Gene3D | Cytochrome P450 | 27 | 517 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506|GO:0016705 | |
Trre12g01065 | 522 | PANTHER | CYTOCHROME P450 82C3-RELATED | 13 | 519 | - | - | |
Trre12g01065 | 522 | SUPERFAMILY | Cytochrome P450 | 38 | 513 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Trre12g01065 | 522 | FunFam | Cytochrome P450 82C4 | 24 | 511 | - | - | |
Trre12g01065 | 522 | Pfam | Cytochrome P450 | 35 | 502 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre12g01065 | Trre-Chr12 | 10582652 | 10585042 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre12g01065 | 1 | 519 | Cytochrome P450 | AT4G31970 | 47.909 | 1.47e-173 | 498 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre12g01065 | - | - | gmx:100802193 | 754.977 |