Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01065 ATGGATTTCTCTCAAAACACAATTGCAATTCTTCTCCTTTCAACAATCATTTTCTTCATAATTTTATTCCTTCACTCCAAATCCAAGAAAACCAAACAGCCCCCAATGGTTCCTGGTGCATGGCCAATAATTGGCCACCTTCCTCTCTTAAGCAAATCTCAAGCAACTCATCATCTTTTTGGTGCCATGGCTGACAAGCATGGTCCTCTTTTCACCATCAAAATCGGCACAGCAACAACTCTTGTGATCAATAATTGGGAAACCGCGAAAGAATGCTATACAACGAACGATACTGCTGTGTCCTATCGTCCAAACCTCGTTGCATTCGAACACATGACATATAATCATGCCATGGTTGGTTTTGCACCTTACGGTCCCTTTTGGCGCGAAATGAGGAAAATTGTTACGTTAAGTTTTCTCTCAAATCATAGAATCGATCTATTAACTCACGTTCGTGTATCTGAAGTTCAAACTTCGATCAGAGAACTTTTCAGTTCTTGGAAAAATAAAAAAGACGAAAACGGATATTTATTAGTTGAGATGAAGAAGTGGTTTCATGAGTTGGCTTTTAATACCGCGCTTCGAATGGTTGCTGGGAAGAGATATTTTGGTGAGAGTGTGATGGTGAAAGAAGAAGAAGCGAATCGATGTTTGAATGCTTTGAGAGAATATATGCGTTTGATTGGTGTTTTTCCTATTGCTGATGCTGTTCCATTTTTAAGGTTGTTCGATTTTGGTGGACATGAGAAGAATATGAAGGAAAATTTTAAGGAATTGGATGCTGTTGTGGCAGAGTGGTTGGATGAGCATAAGAAGAAGAAGGTTGATGATAAGAGTAAAGAAGATCAAGATTTTATGGATGTGATGCTTTCTACAATTGATGGAAGAAATATTCATGGATTTGATTCAGATACTGTCATCAAAGCCACAGCTCTGGCACTAGTTTTGGGAGCAACAGACACTAGCAGTGTTACACACATATGGGCATTATGCTTATTATTGAACAATCCTCATGCACTTAAAAAAGTTAAAGAAGAAATCGATCTCCACATCGGCAAAGAGCGATTGTGCATTACTGAATCAGATATAAATAAGTTGGTATACCTTCAAGCCGTTGTCAAAGAAACACTAAGGTTGTATCCAGCATCACCACTCTCAGGAATTCGTGAATTTAGAGAAGATTGCAAAATTGGTGGCTACCATGTGAAGAAAGGAACTCGACTATTCACGAACTTATGGAAGATCCAAACCGACCCTAGTGTTTGGTCGGATCCATTGGAGTTCAAGCCTGAGAGGTTTCTTACTACTCATAAAGATGTTGATGTTAAGGGTCAGCATTTTGAGTTCTTACCATTCGGAAGCGGAAGAAGGATTTGTCCTGGAATATCTTTCGGCCTTCGAAGTGCTTATTTGACTCTTGCAAATTTTCTTCACTCTTTTGAAGTCTTGAAAACTTCTGATGAGCCTATTGATATGACTGCTGTTGTGGAAACAACCAACATCAAAGTTACTCCTCTTGAAGTTCTCATCAAGCCTCGTTTGTCTCCCGATTATTATGAAACCATGTAA 1569 0.3901 MDFSQNTIAILLLSTIIFFIILFLHSKSKKTKQPPMVPGAWPIIGHLPLLSKSQATHHLFGAMADKHGPLFTIKIGTATTLVINNWETAKECYTTNDTAVSYRPNLVAFEHMTYNHAMVGFAPYGPFWREMRKIVTLSFLSNHRIDLLTHVRVSEVQTSIRELFSSWKNKKDENGYLLVEMKKWFHELAFNTALRMVAGKRYFGESVMVKEEEANRCLNALREYMRLIGVFPIADAVPFLRLFDFGGHEKNMKENFKELDAVVAEWLDEHKKKKVDDKSKEDQDFMDVMLSTIDGRNIHGFDSDTVIKATALALVLGATDTSSVTHIWALCLLLNNPHALKKVKEEIDLHIGKERLCITESDINKLVYLQAVVKETLRLYPASPLSGIREFREDCKIGGYHVKKGTRLFTNLWKIQTDPSVWSDPLEFKPERFLTTHKDVDVKGQHFEFLPFGSGRRICPGISFGLRSAYLTLANFLHSFEVLKTSDEPIDMTAVVETTNIKVTPLEVLIKPRLSPDYYETM 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01065 522 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 CDD CYP82 68 513 - -
Trre12g01065 522 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 Gene3D Cytochrome P450 27 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Trre12g01065 522 PANTHER CYTOCHROME P450 82C3-RELATED 13 519 - -
Trre12g01065 522 SUPERFAMILY Cytochrome P450 38 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01065 522 FunFam Cytochrome P450 82C4 24 511 - -
Trre12g01065 522 Pfam Cytochrome P450 35 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01065 Trre-Chr12 10582652 10585042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01065 1 519 Cytochrome P450 AT4G31970 47.909 1.47e-173 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01065 - - gmx:100802193 754.977