Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01050 ATGTTCTCAAATTGGTACCCACATGACTATATATGTGGCACATGTACTATTTCAGCGGATGAAATTTCCTTCCTTATACTGTACCACCAAATGCTGTACAGGCGGTTGATCGGTGGTGGCGCGGCAGCGACAGTGGCCGTTTCGGATGGCGGCGCCGGCCGGAAGTTGGCCAGATTCGCAGCGGTGATTGTCCGACGGTGTTGGAAGAGGTTGAAATTGAAGCAAATGTCTTACGTTAATGTGCCCTGCACGTGTTTTTTGAAGCCTTTGACTGACATTGGTGCAAAGATCTACGCAGGAAGAGGCATCAGATTTATTCCCAGTGATTCTCAGGTTTTTCTATTTGTGAACTCAAAATGTAAATGGTATTTCCACAACTGTTTGAAGCCTTCAAAGCTCACCGGGCTAAGGATGAACTTTTCTGCATACGATTTTCTTCAATTGAAATGGGAGGGTGAGCTCGATGCATTTTTGTGCTCGGTCAATGATCTGAAGGTCAGCAACATAGTTGATCCAAGGGGACACAATGTTTGTTGCTGGTGCGAAGAGAAACAAATTGAGATTCTTAGAAAGGCATCACCATTTTTAGAGAATCAGAGCCAACTAGAATCTGCAAAAGCTGCTATCGTTGGAGAAAATGTGGATTGCAAGGCCTTGAAAAGAACTAAACTTCATGAGCTAACTAACCAAGAATCTGAGAGTTCAGTAGCTGTTAGAAGAGCTCGGGAATCAAGTTTAAAGCTTCATTCCAGGTAG 756 0.4405 MFSNWYPHDYICGTCTISADEISFLILYHQMLYRRLIGGGAAATVAVSDGGAGRKLARFAAVIVRRCWKRLKLKQMSYVNVPCTCFLKPLTDIGAKIYAGRGIRFIPSDSQVFLFVNSKCKWYFHNCLKPSKLTGLRMNFSAYDFLQLKWEGELDAFLCSVNDLKVSNIVDPRGHNVCCWCEEKQIEILRKASPFLENQSQLESAKAAIVGENVDCKALKRTKLHELTNQESESSVAVRRARESSLKLHSR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01050 251 Pfam Ribosomal protein L24e 94 133 IPR000988 -
Trre12g01050 251 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 94 133 - -
Trre12g01050 251 Gene3D Ribosomal protein L24e 93 138 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01050 Trre-Chr12 10413918 10422709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01050 94 134 Cytoplasmic Ribosomal Protein Gene Family AT3G53020 82.927 1.29e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01050 K02896 - sly:101266177 77.0257