Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre12g01018 | ATGATCCGAAAATTGTTAGAGGAATACGAATCGGGTGGCGATATAAGAGAAGCTTGTAGATGCATGAAAGAATTAGGAATGCCATTTTTTCATCATGAAGTTGTTAAGAAAAGTTTGGTGAAAATTATTGAAAAGAAAAATGAGAGATTATGGGGTTTACTTAAAGAATGTTTTGATTCTGGATTAATAACTATGAATCAAATGGTTAAAGGTTTTGGAAGACTTGAAGAAACTCTTGATGATTTAGCTTTGGATGTTCCTGATGCTAAGAATCAGTTTGGATTTTATGTTGAAAAGGCAAAAAATGAAGGATGGTTGGATAGTTCATATTGTTACAACAATCACTACAAGAAATCTAGGGTTTGCTATGACACGATTTGTAGCTAA | 387 | 0.323 | MIRKLLEEYESGGDIREACRCMKELGMPFFHHEVVKKSLVKIIEKKNERLWGLLKECFDSGLITMNQMVKGFGRLEETLDDLALDVPDAKNQFGFYVEKAKNEGWLDSSYCYNNHYKKSRVCYDTICS | 128 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre12g01018 | 128 | SUPERFAMILY | ARM repeat | 2 | 112 | IPR016024 | - | |
Trre12g01018 | 128 | Gene3D | - | 1 | 113 | - | - | |
Trre12g01018 | 128 | ProSiteProfiles | MI domain profile. | 1 | 116 | IPR003891 | - | |
Trre12g01018 | 128 | PANTHER | PROGRAMMED CELL DEATH 4 | 2 | 110 | IPR039778 | GO:0045892 | |
Trre12g01018 | 128 | SMART | ma3_7 | 2 | 107 | IPR003891 | - | |
Trre12g01018 | 128 | Pfam | MA3 domain | 2 | 107 | IPR003891 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre12g01018 | Trre-Chr12 | 10187158 | 10187544 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre12g01018 | 3 | 107 | Eukaryotic Initiation Factors Gene Family | AT5G57870 | 33.333 | 3.12e-11 | 57.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre12g01018 | - | - | gmx:102668745 | 201.83 |