Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00933 ATGAACACTACTAATCTCATCCAATCCATATTATCAATAATCACATCTTTGTCTCTAACCCAATTAATTCCATACCTATTATGCTTTCTCATTTACCTTCTTTTCCTTGAACAGATTTCATACCTCTCCAAAAAAAGGTTCATTCCAGGCCCATCTTTTGTTCTTCCTGTCATAGGCAATGCAATCCCATTGGTCCGTAACCCAACTAAATTTTGGGACCTTCACTCCACTCTAGCCAAATCAATCCCTATGGGCTTTTCAGTTGACTACATATTAGGCAACTTCATAGTTTTCATTAGAGACACAGAACTCTCCCATCACAAGATTCTCCGTCGGCGGATCGCACCCAACTTTACTCCGAAGGCGCTTTCGACCTACACCTCACTGCAGCAGATTATTATTCTCAAACACCTTAAGTCATGGGTTGAGAATGCCCACACCTGTGACTCTATTCCAATCCGTGGGTTGGCGCGTGATATGAATTTAGAAACCTCTCAGACTGTTTTCGTGGGGCCCTATTTGAGCCTAAAAGCCCGAGAGATATTTGAGCGTGATTACTTTATCTTCAACTTCGGTCTAACGAAGCTTCCATTTGACTTTCCTGGAACTGCATTTCGTAATGCGAAACTCGCCTGTGGCCGTCTCGCCGGAACCTTAGCTAGTTGCACAACAATGAGTAGGGAGAAGATGGAGAATGGCGAAGAGCCTTCGTGTCTCATTGATTTCTGGATGCAGGATACAATAAGGGAGAATGAGGAATTGAAGGTTAATGGAGTTACGACACCGCCATTTTCCACTGACGCTGAGATTGGCGGTTATCTCTTTGATTTCCTCTTTGCGGCACAAGATGCATCCACGTCATCACTTTTATGGGCAGTGGCATTGTTAGATTTGCATCCGGAGGTTCTTGACAAAGTAAGGGAGGAAGTAGCTGGAATCTGGTCGCCAGAAACAGACACACTGATAACTTCAGAGCAACTAATAGAAATGAAGTACACGCAAGCAGTTGCGCGTGAGGTTGTTAGGTATAGACCACCAGCAACACTTGTGCCACATATTGCGACAGAGAAGTTTCCATTAACGGAATCATACTCAATTCCGAAAGGAACAATTGTTTTTCCTTCGGTGTTCGAGTCATCATTTCAAGGTTTTACTGAACCAGATCGATTCGATCCAGACCGATTCTCAGAAGGAAGAAAAGAGGACCAAATATTTAAAAGAAACTTCCTAGCGTTTGGAGTTGGACCACACCAATGTGTGGGCCAGAGGTACGCTTTGAATCAACTTGTTCTGTTCATTGCTATGTTCACATATTTGATTGATTTCAAGAGAGATAGAACGGATGGTTGTGATGAGACCATGTATGTTCCTACAATTTGCCCTAAAGATGACTGCAAGGTTTTTCTGTCTAAGCGTTGCACAAGGTACCCTTCCTTTTCCAGGGTTGAGGAGCCTGTGAAATGA 1464 0.4331 MNTTNLIQSILSIITSLSLTQLIPYLLCFLIYLLFLEQISYLSKKRFIPGPSFVLPVIGNAIPLVRNPTKFWDLHSTLAKSIPMGFSVDYILGNFIVFIRDTELSHHKILRRRIAPNFTPKALSTYTSLQQIIILKHLKSWVENAHTCDSIPIRGLARDMNLETSQTVFVGPYLSLKAREIFERDYFIFNFGLTKLPFDFPGTAFRNAKLACGRLAGTLASCTTMSREKMENGEEPSCLIDFWMQDTIRENEELKVNGVTTPPFSTDAEIGGYLFDFLFAAQDASTSSLLWAVALLDLHPEVLDKVREEVAGIWSPETDTLITSEQLIEMKYTQAVAREVVRYRPPATLVPHIATEKFPLTESYSIPKGTIVFPSVFESSFQGFTEPDRFDPDRFSEGRKEDQIFKRNFLAFGVGPHQCVGQRYALNQLVLFIAMFTYLIDFKRDRTDGCDETMYVPTICPKDDCKVFLSKRCTRYPSFSRVEEPVK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00933 487 Gene3D Cytochrome P450 38 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Trre12g00933 487 SUPERFAMILY Cytochrome P450 43 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 PANTHER CYTOCHROME P450 26 87 437 - -
Trre12g00933 487 Pfam Cytochrome P450 105 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00933 487 CDD CYP61_CYP710 85 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00933 Trre-Chr12 8802151 8803718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00933 13 480 Cytochrome P450 AT2G34500 59.881 0.0 605