Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00930 ATGAGTACTACTAATCTCATTAAATCCATAATATCAATAACAACATCTTTGTCACTAACGCAATTAATGCCATACTTAATATGCTTTCTCCTTTTCCTTCTATTCCTTGAACAAATCTCATACCTCACCAAAAAAAGGTTCATTCCAGGTCCATATTTTGTTCTTCCTGTCATAGGCAATGCAATCCCATTGGTCCGTGGCCCAACAAAATTTTGGGAGCTTCAATCCACTCTAGCCAAATCTACACCTTTGGGTTTTTCAGTTAATTACATATTAGGCAATTTTATAGTCTTCATTAGAGACACAGAACTCTCCCGTAAGGTTTTCACCAATGCAAAGCCTAATGCTTTTCAGCCCTTGGGACACCCATTTGGTAAGAAGCTATTTGGTGAGCATAATCTTCATTACATGTTGGGCGAAGAACACAAGAACTTGCGCCGTCGAATCGCGCCCAACTTCACTCCGAAGGCACTTTCCACCTACACCTCCTTGCAGCAGATTATTATTCTCAAACACCTTAAGTCATGGGTTGAGAAAGCCCAAACATGTGGCTCTATTCCAATTCGTGTATTGGCCCGTGACATGAATTTAGAAACTTCTCAGACTGTTTTTGTGGGGCCCTATTTGGACCAAAAAGCCCGAGAGATATTTGAGCGTGATTATTTTATGTTCAATGTAGGTCTAACGAAGCTTCCTTTTGACTTTCCTGGAACTGGGTTTCGTAATGCGAGACTTGCTTGTAACCGTCTTGCTGAAACCCTAGCTATTTGCACAAAGATGAGTAAGGAGAAGATGGAGAAAGGCGAAGAGCCATCGTGTCTCATTGATTTCTGGATGCAGGATACAATAAGGGAGACTGAGGAATTGAAGGTTAATGGAGTTACGGCGCCGCCGTTTTCCACCGACGCTGAGATTGGCGGTTATCTCTTTGATTTCCACTTCACAGCACAAGATGCATCCACGTCATCACTGCTATGGGCGGTGGCATTGTTAGATTCGCATCCGGAGGTTCTTTCCAAAGTTAGGGAGGAGGTCGCTAGAATCTGGTCGCCGGAGTCTGACACACTGATAACTTCAGAGCAACTAACAGAAATGAAGTACACGCAAGCGGTTGCGCGTGAAGTTGTTAGGTATAGACCTCCTGCAACTCTTGTGCCGCACATTGCAATACAAACGTTTCCGTTAACGGAATCATACTCGATACCCAAAGGAACAATTGTTTTTCCGTCGGTGTTCGAGTCATCGTTTCAAGGTTTTACTGAACCAAATCGGTTTGATCCAGACCGAGAGATAGAACAGATGGTTGTGATGAGACCGCGTATGTTCCTACAATTTGCCCTAAAGATGATTGCAAGGTTTTTTTTGTCTAAGCGTTGCACAAGGTACCCATTCTTTTCGGGGGTTGAGGAGCTTGTTAAATGA 1422 0.4325 MSTTNLIKSIISITTSLSLTQLMPYLICFLLFLLFLEQISYLTKKRFIPGPYFVLPVIGNAIPLVRGPTKFWELQSTLAKSTPLGFSVNYILGNFIVFIRDTELSRKVFTNAKPNAFQPLGHPFGKKLFGEHNLHYMLGEEHKNLRRRIAPNFTPKALSTYTSLQQIIILKHLKSWVEKAQTCGSIPIRVLARDMNLETSQTVFVGPYLDQKAREIFERDYFMFNVGLTKLPFDFPGTGFRNARLACNRLAETLAICTKMSKEKMEKGEEPSCLIDFWMQDTIRETEELKVNGVTAPPFSTDAEIGGYLFDFHFTAQDASTSSLLWAVALLDSHPEVLSKVREEVARIWSPESDTLITSEQLTEMKYTQAVAREVVRYRPPATLVPHIAIQTFPLTESYSIPKGTIVFPSVFESSFQGFTEPNRFDPDREIEQMVVMRPRMFLQFALKMIARFFLSKRCTRYPFFSGVEELVK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00930 473 Pfam Cytochrome P450 49 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00930 473 Gene3D Cytochrome P450 40 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00930 473 CDD CYP61_CYP710 85 445 - -
Trre12g00930 473 PANTHER CYTOCHROME P450 26 47 439 - -
Trre12g00930 473 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00930 473 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00930 473 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g00930 473 SUPERFAMILY Cytochrome P450 41 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00930 Trre-Chr12 8793128 8794697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00930 19 446 Cytochrome P450 AT2G34500 62.269 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00930 K09832 - gmx:100808148 644.039