Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00921 ATGAAGAGTAGTTTTCTTAGGTGTATGGCAACCTTGGAAAAACATAAACCTTATGTTGCAATGCTCTTTATTCAATTTATCTATGCAGGAATGGCTCTGCTTTCAAAGGCAGCAATTTCCAAAGGAATGAGTCCTTATGTGTTTGTTGTTTATCGCCAAATCTTTGCTTCACTTGCCTTATCTCCATTTGCTTATTTTGACAGTAAGCATGGTGCTCCTTTGTCATGCAACTTGTTGTGCAAATTGTTTCTAGTTTCTCTTGTTGGGTTAACAGCAAGTTCAAACCTTTACTATGTTGCTATCAACTATACCTCTGCAACATTTGCTGCTGCAAGCACAAACACAATCCCTTCCATTACTTTTATCATGGCTGTTTTAATTGGGGTTGAAAGCATTTCAATAAAATATATGCATGGAGTGGCAAAAATTTTGGGCTCTTTTTTATGCATTTCAGGGGCTATAGTATTTGCTTTAGTGAAAGGTCCTCCATTAGATTTCATAGGGTGGCATCATGAAAATCAGAATCATAATTCTCATGAATTCACAAAGATTCATTCCAAAGAGGATAACATTAAAGGCTCTCTTATGATGCTCTTAGCAAACACTGGTTGGTCCTTGTGGCTTATTTTGCAGGGATTTATTGTAAGGCAATACCCAGCAAAATTTCGGCTCACAATTATACAATGCTTTTTTAGCTTCATACAATCAGGTATTTTGGCCATTGCAATGGAGAGGAACCCTTCTGCATGGAAGCTAGGATGGGATTTTCATCTTCTTTCTGTGGCTTATTGTGGTATAATTGTAACTGGCATTTGTTATTGGCTACAAGTATGCACAATAGAGATTAAAGGTCCAGTTTTCACTGCCATGTTCACCCCTCTAGCTCTTGTACTCACAGCCATTTTCTCAGCTATTTGGTGGAAAGAAACACTCTTCTGGGGAAGTATTGGTGGCACCATTTTGCTAGTGATTGGACTCTATAGTGTTTTGTGGGGGAAGAATAAGGAAGGTGTAAAAGAGGAAAACCATGAAGATGAAGAAGCAAAAGTAGAGACCAAATTGGAGTGCGTTATATAG 1077 0.3807 MKSSFLRCMATLEKHKPYVAMLFIQFIYAGMALLSKAAISKGMSPYVFVVYRQIFASLALSPFAYFDSKHGAPLSCNLLCKLFLVSLVGLTASSNLYYVAINYTSATFAAASTNTIPSITFIMAVLIGVESISIKYMHGVAKILGSFLCISGAIVFALVKGPPLDFIGWHHENQNHNSHEFTKIHSKEDNIKGSLMMLLANTGWSLWLILQGFIVRQYPAKFRLTIIQCFFSFIQSGILAIAMERNPSAWKLGWDFHLLSVAYCGIIVTGICYWLQVCTIEIKGPVFTAMFTPLALVLTAIFSAIWWKETLFWGSIGGTILLVIGLYSVLWGKNKEGVKEENHEDEEAKVETKLECVI 358
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00921 358 PANTHER WAT1-RELATED PROTEIN 16 340 IPR030184 GO:0016020|GO:0022857
Trre12g00921 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 151 - -
Trre12g00921 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 335 - -
Trre12g00921 358 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Trre12g00921 358 Pfam EamA-like transporter family 16 150 IPR000620 GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre12g00921 Trre-Chr12 8662424 8669336 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00921 12 355 Nodulin-like Gene Family AT2G37460 36.416 9.24e-81 249
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00921 - - lja:Lj0g3v0009669.1 571.237