Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00918 ATGAGAAACGTGAAAAAGAAGAAAGAGAGTACAGGTTATGGATGCAGGGAGGAGAAACGGTGGTCGGGGGAGGTGCGACGAACAGAACAGGCGGCAGGAGATAGTCAGGGGGATCTGGAGACAGACACCGCTCTCAGTAATGCTCAAACCCAATTATGGTACCATTTTTTCTCATCATGCTCTTCATTTCTTCATTCTTGGATTGATTCCATCAAAAAGATTCAATCTTGGCTTCTGGAAATGGAAGGGAATTTAGCTCAGGGAGGTATAATTCAAGGTGGTGGTGGTGGTGGTGCTTCTTTTGGTGGTTTTGATTTGCCGGGATCGATGCGAGTTAATCGTCAAGCGCAACATACAATGAACCAACATCAAGCTCATCCGTGTCAAGGGCCGTCGGTGCATTCGTCAATTCATGATGGTTTTCCTCTTACAATGGGAACATTGCAGAACTGTGATCAGACAATATCGATGAATGAGTTTGGTCAGGGAGATAGAAACAAACACTCGGCGAGTGAGGAAGACGAGCCTGAGGAAGGTGGTGATGGTCATCATCAAGAAGGTGGTAGAGGGAAAAAGGGGACGCCTTGGCAGCGTGTGAAATGGACTGATAAGATGGTGAGGCTTTTGATAACGGCGGTGTCTTATATTGGTGAGGACGGAAGTTCTGAAGGTGGGGGTGGAGGAAGGAGGAAATTTGCGGTGTTGCAGAAAAAGGGTAAGTGGAAATCTATTTCTAAGGTTATGGCTGAAAGAGGTTATCGTGTTTCACCTCAGCAATGTGAGGATAAATTCAACGATCTTAATAAAAGGTACAAAAAGCTTAACGATATGCTTGGAAGGGGAACTTCTTGTCAGGTTGTTGAGAATCCGGCTTTGTTGGATGTAATAGATTTTCTTAACGAGAAAGAAAAGGATGATGTTAGAAAAATTTTAAACTCGAAACATCTCTTCTATGAAGAGATGTGTTCTTACCATAATTGTAATAGATTGCATTTGCCGCACGATCCTGCATTGCAACGTTCCCTGCAGATAGTTCTCCGAAATAGAGATGACCATGATAACGATGATGTGAGAAGGTCCTATCATGATGACCATGACGAAGATGATCATGATATGGAAACTGATGATCACGATGAGTTCGAAGAGAATTTTGCTTCCCATGGTGATAGTCGAGGAATCTTTGGAGGATTGGGAGGAACTACGAAAAGACCAAGACAAGGCCAAGGACACGAAGATCCTACTACTTTCGGGAATCCTTTAAATTGTCAGGAGTACCAAAAAACTTCACATCCTCATGGACAAACGGCCCAAACAGACGGAAATCAAGCTTTACCTGAAAACATGAGAGCAGCTTGGTTACAGAAGCAATGGTTGGATTCTCGCTCAGTTCAGTTAGAAGAACAGAAGCTACAAATTCAGGTTGAGATGCTGGAATTAGAGAAACAAAGATTCAAGTGGGAGAGGTTTAGCAAGAAACAAGACCGGGAGTTGGAGAAGTTCAAGCTGGAGAACGATAGAATGAAGATTGAGAATGAACGTATTGCTTTAGAACTAAAGCGAAAGGAGATCGGCGGAACCAGCTTTAACTAG 1590 0.434 MRNVKKKKESTGYGCREEKRWSGEVRRTEQAAGDSQGDLETDTALSNAQTQLWYHFFSSCSSFLHSWIDSIKKIQSWLLEMEGNLAQGGIIQGGGGGGASFGGFDLPGSMRVNRQAQHTMNQHQAHPCQGPSVHSSIHDGFPLTMGTLQNCDQTISMNEFGQGDRNKHSASEEDEPEEGGDGHHQEGGRGKKGTPWQRVKWTDKMVRLLITAVSYIGEDGSSEGGGGGRRKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDFLNEKEKDDVRKILNSKHLFYEEMCSYHNCNRLHLPHDPALQRSLQIVLRNRDDHDNDDVRRSYHDDHDEDDHDMETDDHDEFEENFASHGDSRGIFGGLGGTTKRPRQGQGHEDPTTFGNPLNCQEYQKTSHPHGQTAQTDGNQALPENMRAAWLQKQWLDSRSVQLEEQKLQIQVEMLELEKQRFKWERFSKKQDRELEKFKLENDRMKIENERIALELKRKEIGGTSFN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00918 529 Coils Coil 490 519 - -
Trre12g00918 529 Pfam Myb/SANT-like DNA-binding domain 198 324 IPR044822 -
Trre12g00918 529 MobiDBLite consensus disorder prediction 1 33 - -
Trre12g00918 529 MobiDBLite consensus disorder prediction 352 440 - -
Trre12g00918 529 Gene3D - 201 273 - -
Trre12g00918 529 PANTHER F16F4.11 PROTEIN-RELATED 81 523 - -
Trre12g00918 529 MobiDBLite consensus disorder prediction 411 440 - -
Trre12g00918 529 MobiDBLite consensus disorder prediction 165 197 - -
Trre12g00918 529 MobiDBLite consensus disorder prediction 158 197 - -
Trre12g00918 529 Coils Coil 462 487 - -
Trre12g00918 529 MobiDBLite consensus disorder prediction 352 367 - -
Trre12g00918 529 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00918 Trre-Chr12 8569446 8573308 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre12g00918 Myb_DNA-bind_4 1.5e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00918 - - gmx:100812134 649.432