Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00837 ATGGAGGTTACATCTCCTACCAAAAACACCACCAAGAATACCAATGACAAGGGCTTGTCCCTTGAATTGGATAGTGTCAAGCCGGTTGCGAGCCCCCTCCGTAAGATGATTGTTGTGGCGTCCATTGCAGTCGGTGTTCAGTTTGGATGGGCTCTACAGCTATCCTTATTGACTCCATACGTGCAAACTCTTGGAGTTCCGCACGTATGGTCGTCCTTTATCTGGCTATGTGGTCCAATCTCTGGACTAGTAGTCCAGCCTATAGTAGGTTACTATAGTGACCGAAGCACTTCAAGCTTTGGTCGCCGACGCCCTTTCATCTTTGCTGGAGCTCTTGCTGTTGCTATTGCTGTTTTCCTCATTGGTTATGCAGCTGATCTCGGCCACTCCTTGGGTGATGACTTGTCTAAAAAAACCCGACCGCGGGCTGTGGCTATATTCGTCGTTGGATTTTGGATCCTTGACGTTGCTAACAACACGCTCCAGGGACCGTGCCGTGCTTTCCTAGCAGACCTTGCGAACGGCGATGAGAAAAAGACGAGAACAGCAAACAGTTTCTTCTCTTTCTTCATGGCCGTCGGTAATATCCTTGGATATGCCGCTGGCTCCTTTAGCAAACTCCACAAAGTATTCCCCTTCACTGAAACCGAAGCATGTAACGTCTTTTGCGCGAATCTTAAAAGTTGCTTCTTTTTCGCAATCCTCCTCTTAATCGTACTCGCTAGCATAGCCCTCATCTACGTCAAAGAGATACCAAAGACGAAGCTAGAGGTGCCCGATGACGACAAACAAGTTTCTTGTGCCGGAGAGTTGTTTCATGCATTGAAGGAATTGAAGAGGCCAATGTGGATATTGATGGCAGTAACAGCCGTGAACTGGATCGCGTGGTTCCCATTTTTCTTGTTCGATACCGACTGGATGGGCCGTGAGGTGTACGGAGGAGTTGCCGGAGAGAAAGCATATGACACTGGTGTGAGAGTTGGTTCTTTGGGACTTATGCTTAATGCTCTTGTTCTTGGGTTTATGTCTTTAGCTGTGGAACCATTAGGGAAATTGGTTGGAGGAATTAAAAGGCTTTGGGGGATTGTTAATTTTATTTTGGCTATTTGTTTGGCAATGACTGTCGTCATCTCGAAAATAGCTGAACATGAACGTCAGACATCCGGTGGTGCAACTGTCGGACATCCTTCCGATGGTATCAAGATTAGTGCCATGTTCTTCTTCGCAATTCTTGGAATTCCTATGGCGATTACTTTCAGTGTTCCATTTGCTCTAGCATCAATTTATTGCAGTGCCTCAGGGGCAGGACAAGGTTTATCTATAGGAGTATTGAATCTTGCAATTGTGGTACCACAGATGTTGGTGTCAGCACTAAGTGGACCTTGGGATGGTCTATTTGGTGGTGGTAATTTGCCGGCGTTCGTGGTGGGTGCGGTGGCTGCCGCAGTTAGTGCCATATTAGCGATGGTCTTGTTGCCGTCAGTAAAACCAGAAGATGAGGCCAAGGTTAAACTTGCAGCAGGTGGTTTTCATTAA 1536 0.4694 MEVTSPTKNTTKNTNDKGLSLELDSVKPVASPLRKMIVVASIAVGVQFGWALQLSLLTPYVQTLGVPHVWSSFIWLCGPISGLVVQPIVGYYSDRSTSSFGRRRPFIFAGALAVAIAVFLIGYAADLGHSLGDDLSKKTRPRAVAIFVVGFWILDVANNTLQGPCRAFLADLANGDEKKTRTANSFFSFFMAVGNILGYAAGSFSKLHKVFPFTETEACNVFCANLKSCFFFAILLLIVLASIALIYVKEIPKTKLEVPDDDKQVSCAGELFHALKELKRPMWILMAVTAVNWIAWFPFFLFDTDWMGREVYGGVAGEKAYDTGVRVGSLGLMLNALVLGFMSLAVEPLGKLVGGIKRLWGIVNFILAICLAMTVVISKIAEHERQTSGGATVGHPSDGIKISAMFFFAILGIPMAITFSVPFALASIYCSASGAGQGLSIGVLNLAIVVPQMLVSALSGPWDGLFGGGNLPAFVVGAVAAAVSAILAMVLLPSVKPEDEAKVKLAAGGFH 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00837 511 NCBIfam sucrose/proton symporter 32 496 IPR005989 GO:0005886|GO:0008515|GO:0015770
Trre12g00837 511 Gene3D MFS general substrate transporter like domains 31 492 IPR036259 -
Trre12g00837 511 PANTHER SUGAR TRANSPORTER 32 491 - -
Trre12g00837 511 SUPERFAMILY MFS general substrate transporter 36 498 IPR036259 -
Trre12g00837 511 Pfam MFS/sugar transport protein 43 295 - -
Trre12g00837 511 CDD MFS_SLC45_SUC 36 471 - -
Trre12g00837 511 FunFam Sucrose transport protein 30 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00837 Trre-Chr12 7475416 7477556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00837 33 511 Sucrose Transporter Gene Family AT1G22710 67.556 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00837 K15378 - gmx:100784153 734.947