Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00807 ATGGATCATTCTCTCATCCCAAGCTTCCTTTACTCCTCTACTTCATCGCCGCAAAAGAATATCATAGATGATGTTTCCACCATCCATCATACAACGATGGAATCTTCGAAATTTATGATTCCTTCTCCCAGTGAGACTGGAAGAAGGAATATAAAGTTGTTCTCTCGTGATTATTATCTCGCTTGTGCCGTTGGTGGAAGTATATGTTGTGGTTTCACTCACATGGCGGTTACTCCTCTTGATCTTGTCAAATGTAATATGCAGATTGACCCTGCAAAGTACAAGAGCATTTCCTCTGGATTTGGAGTGATGCTTAAGGAACAGGGATTTAGAGGATTTTTTAGAGGATGGGCACCAACATTTCTTGGTTATAGTGCACAAGGTGCATTCAAATATGGACTCTATGAATATTTCAAGAAGACCTATTCAGATGCTGTTGGTCCAGATTATGCTACAAAGTATAAGACATTAATCTACCTTGCTGGATCAGCATCTTCTGAGGTTATTGCTGATGTTGCACTTTGTCCATTTGAGGCAATTAAGGTTAGAGTTCAAACTCAGTCTGGTTTTGCTAGAGGCCTTTCTGATGGGTTACCTAAATTGCTTAGATCTGAAGGAGTCTCAGGGTTGTATAAGGGAATTGTGCCTCTTTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTATGAAAACATTGTTGAGATGATCTACAAGCATGCAATTCCCAAACCAAAAGATGAATGCACCAAAACCCTACAACTTGGTGTGAGTGTTGTTGGTGGATATTTAGCTGGTATATTATGTGCTGTTGTCTCTCATCCTGCAGATAATCTTGTTTCTTTCCTCAACAGTTCCAAAGGAGCAACTGCTGCTGATGCCGTAAAGAAATTGGGATTATGGGGTATGTGTACACGCGGACTCCCTCTTCGTATTCTTATGGTGGGAACTCTAACTGGAGCTCAATGGGGAATTTATGATGCATTCAAAGTTTCTGTCGGCCTGCCAACAACTGGTGGTGTTACACCTGCTCCAGCTTCTGCTTCTTAG 1056 0.4129 MDHSLIPSFLYSSTSSPQKNIIDDVSTIHHTTMESSKFMIPSPSETGRRNIKLFSRDYYLACAVGGSICCGFTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVMLKEQGFRGFFRGWAPTFLGYSAQGAFKYGLYEYFKKTYSDAVGPDYATKYKTLIYLAGSASSEVIADVALCPFEAIKVRVQTQSGFARGLSDGLPKLLRSEGVSGLYKGIVPLWGRQVPYTMMKFASYENIVEMIYKHAIPKPKDECTKTLQLGVSVVGGYLAGILCAVVSHPADNLVSFLNSSKGATAADAVKKLGLWGMCTRGLPLRILMVGTLTGAQWGIYDAFKVSVGLPTTGGVTPAPASAS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00807 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 141 IPR018108 -
Trre12g00807 351 Gene3D Mitochondrial carrier domain 58 333 IPR023395 -
Trre12g00807 351 SUPERFAMILY Mitochondrial carrier 58 330 IPR023395 -
Trre12g00807 351 FunFam Phosphate carrier protein, mitochondrial 57 335 - -
Trre12g00807 351 Pfam Mitochondrial carrier protein 157 242 IPR018108 -
Trre12g00807 351 Pfam Mitochondrial carrier protein 59 144 IPR018108 -
Trre12g00807 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 154 238 IPR018108 -
Trre12g00807 351 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 29 345 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00807 Trre-Chr12 7208798 7212137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00807 3 351 Chloroplast and Mitochondria Gene Families AT5G14040 68.306 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00807 K15102 - gmx:100804257 539.65