Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00795 ATGGAACCCGAATCCATACCTTCATCTTCTCGAAATCCCTCTCAGTTGTCGTGGATTAACTTGTCTAGGAATTTATTATTAGCATATCAAAGCTTTGGTGTAGTATATGGAGATCTAAGCACATCACCTCTCTATGTGTATACAAGTACATTTAAAGGAAAATTGAAGGACCATCATGATGAAGAAACTATCTTTGGTGTTTTTTCATTGATTTTTTGGACTCTTACATTAATACCATTGCTTAAATATGTATTAATCCTATTGAGTGCCGACGATAATGGTGAAGGTGGGACATTTGCTCTCTATTCACTGCTATGCAGGCATGCCAAATTTAATTTGCTTCCAAATCAACAAGCAGCCGATGAGGAGCTATCGTCGTACAAATACGGTCCGTCGTCACAGGCTGGAGCTACGTCTCCATTGAAGTTGTTTTTGGAGAAGCACAGACGGTTAAGAACAGTCCTTCTTGTTGTCGTGCTATTTGGTGCTTGCATGGTCATAGGTGATGGTGTACTTTCTCCGGCTATTTCAGTTCTGGCATCGGTATCAGGATTAAAATATACACAGGCGAAGTTCAATGACGGCGAACTTGTCATACTCGCATGCGTCATACTGGTTGGCCTATTTGCTCTACAACATTGTGGCACACATAGAGTCTCGTTTATGTTTGCACCAATTGTAATCATATGGCTTCTATCGATTTTAATTGTCGGGGTTTATAATATAATACACTGGAATCCAAAAATAGTCTTTGCTATCTCCCCGCAATATATCGTCAAGTTCTTCATCAAGACTGGAACTGAGGGTTGGATTTCTCTCGGAGGGATACTTCTTTGTATCACTGGAGCCGAAGCTATGTTTGCAGATCTTGGTCATTTTACTGCTTCGTCAATAAGGATTGCGTTTGGTTTTGTTATATATCCGTGTTTGGTAATGCAATACATGGGCCAAGCAGCTTTTTTGTCTAAAAACCTCGAGTCTGTTCATAATAGTTTTTACGACTCAATACCCGGACCTATATTTTGGCCGGTTTTTGTTATCGCTACAATGGCTGCTATTGTTGGGAGTCAAGCTACTATCACCGCCACTTTCTCCATCATCAAACAGTGTCATGCACTTGGTTGTTTTCCTCGCGTTAAAGTTGTACACACCTCGAAACACATATTTGGACAGATCTACATCCCAGAAATAAACTGGATTCTTATGATCCTGACTCTTGCTGTAACCATTGGATTTCATGACACAACCTTAATCGGAAACGCTTATGGACTAGCTTGTATGACGGTAATGTTCGTAACTACATTTCTGATGGCGCTAGTCATAATCTTTGTCTGGCAGAAAAGCATCCTTGTTGCTTCGATATTCCTTTTGTTCTTTTGGGTGATAGAAGGTGTGTATTTATCAGCGGCGTTCCTAAAAGTGCACCAGGGAGGATGGGTTCCTCTTGTCTTGTCGTTCTTCTTTTTGATTGTTATGTATGTATGGCATTATGGTATTCGTAGGAAGTACAAATATGATCTACACAACAAAGTTTCATTGAAATGGTTACTAGGTTTAGGCCCTAGTCTCGGAATTATCCGTGTCCCAGGGATCGGTCTCATCTACTCGGAACTTGCAACGGGAATACCAGCTATATTCACCCACTTTGTAACTAACCTCCCTGCATTTCACAAGGTGTTGGTTTTTGTTTGCGTGAAATCAGTTCCCGTTCCACATGTCTCACCAGAAGAACGTTTTCTGATTGGCCGAGCTTGTCCGAGACCGTATCGAATGTATAGGTGCATTGTTAGATACGGATACAAGGACATTAAGAAGGACGACGGGGAGTTTGAGAATCATCTCATACAAAGCATAATGGAGTTTATCCAGATGGAGGCAGTGGAACCGCAACTCTCGAGTTCCGAAACTTCTTCATTTGATGGGAGGATGGCTGTTATCGGTACCAGAAGCTTAGCATCATCGCCAAGCTTGATAGCATCCGAGCAAGAAGATACTGATGTGGACGAAAGCATCCCTAGTAGCAGATCTATAACACTGCGACGCTTGCAATCCACATTTGATGATGAAAACCCGCAAGTCAGAAGGCGTCGAGTAAGATTTCAAGTGCCTAACAGTCCTGGATTGGATAACGCTGTTAGAGAAGAGATTTTAGAATTAATCCAAGCCAAAGAGGCTGGAGTCGCGTATATAATGGGACACTCGTATGTGAAAGCAAGGAAATCGTCGTCATTCTTGAAAAAGCTCGTGATTGATGTGGGATACTCGATTCTGCGCAAGAATTGCAGGGGTCCAGCTGTGGCACTCAACATTCCTCACATCAGTCTTATCGAAGTCGGAATGATATATTATGTCTAG 2355 0.4187 MEPESIPSSSRNPSQLSWINLSRNLLLAYQSFGVVYGDLSTSPLYVYTSTFKGKLKDHHDEETIFGVFSLIFWTLTLIPLLKYVLILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAGATSPLKLFLEKHRRLRTVLLVVVLFGACMVIGDGVLSPAISVLASVSGLKYTQAKFNDGELVILACVILVGLFALQHCGTHRVSFMFAPIVIIWLLSILIVGVYNIIHWNPKIVFAISPQYIVKFFIKTGTEGWISLGGILLCITGAEAMFADLGHFTASSIRIAFGFVIYPCLVMQYMGQAAFLSKNLESVHNSFYDSIPGPIFWPVFVIATMAAIVGSQATITATFSIIKQCHALGCFPRVKVVHTSKHIFGQIYIPEINWILMILTLAVTIGFHDTTLIGNAYGLACMTVMFVTTFLMALVIIFVWQKSILVASIFLLFFWVIEGVYLSAAFLKVHQGGWVPLVLSFFFLIVMYVWHYGIRRKYKYDLHNKVSLKWLLGLGPSLGIIRVPGIGLIYSELATGIPAIFTHFVTNLPAFHKVLVFVCVKSVPVPHVSPEERFLIGRACPRPYRMYRCIVRYGYKDIKKDDGEFENHLIQSIMEFIQMEAVEPQLSSSETSSFDGRMAVIGTRSLASSPSLIASEQEDTDVDESIPSSRSITLRRLQSTFDDENPQVRRRRVRFQVPNSPGLDNAVREEILELIQAKEAGVAYIMGHSYVKARKSSSFLKKLVIDVGYSILRKNCRGPAVALNIPHISLIEVGMIYYV 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00795 784 NCBIfam potassium uptake protein 27 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre12g00795 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre12g00795 784 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00795 Trre-Chr12 6955647 6960206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00795 1 784 Inorganic Solute Cotransporters AT3G02050 75.539 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00795 K03549 - gmx:100790329 1342.02