Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00758 ATGTTCTGCTTCAATGCTTCATTTCAATCATTAGCTTCTGCTCCACAATGTGTGAGCCTTTCCTCTCTTCCATCAGTCCCTTTGTTGTCTCATAATCATGCATTGAAGACCAATTCTCATTATCGAAAGATTGGTCGCGATGTTATCGTAATGGCAACAGGAGATGCACCAGCAGAAACTGAGGTGCCTGAGTTTGTTAAGACTCTTCAAGATGCTTGGGACAAAGTTGATGATAAATATGCAGTGGGTTCATTGGTTGTAGCTAGTGTGATTGCACTATGGGGTTCAACTGGTTTGATCTCAGTGGGAATGGAAGAAGGATTAGATTGTAGGCTCCCGTTTTTAGTGAAGATGCTAAATATTACATGGGTCAGCCTTCACCCACATGAGATATCTTTGAAGGACATTGATCAAGTTGCCAAGACCTCATTTCCTTTGTGCATGCGTCACCTGTTTGATAAGCTGGAAGAGGACCATCATTTAAAGCATGGTGGGAGGATGCAACTAGGCCTCTTTCTCAAGGTTGGTATGAGCATATTGAAAACACCGTTAAATGTAGCTTGA 564 0.422 MFCFNASFQSLASAPQCVSLSSLPSVPLLSHNHALKTNSHYRKIGRDVIVMATGDAPAETEVPEFVKTLQDAWDKVDDKYAVGSLVVASVIALWGSTGLISVGMEEGLDCRLPFLVKMLNITWVSLHPHEISLKDIDQVAKTSFPLCMRHLFDKLEEDHHLKHGGRMQLGLFLKVGMSILKTPLNVA 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00758 187 PANTHER DNA PRIMASE LARGE SUBUNIT 129 178 IPR007238 GO:0006269
Trre12g00758 187 Pfam Eukaryotic and archaeal DNA primase, large subunit 129 174 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00758 Trre-Chr12 6574084 6576225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00758 130 179 Core DNA Replication Machinery Family AT1G67320 82.353 1.25e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00758 - - aprc:113849332 125.561