Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00734 ATGGATGCTACAACAGGTCAAAGTCTCTATCCATTGCACCATAGCAAAACTATTCACCTGGTAAGGCATGCCCAAGGAGTTCATAATGTGGAAGGAGAGAAGAACCATGATGCTTACTTATCGGACGATCTTTTTGATGCAAACCTAACCCCTCTTGGCTGGAAGCAGTTTGTTAGAGCCTTGGTGATATTATGTTGGGTCAAACAAGGTAAACCAAAATCCACAATATCGAGGCTACACTTCTTGGTGTTGATAAGTTTGGCCACAAGTGTTACGACAAAACTGAAAACACGCAGTATGGAAGTTGGAAATAAAATCATGGCTGAAGAGAATGATGGCTGCCAAGCTTTTGATGAAGCAATTTCGGAGCTTAACACCTTGAATACGGAGTCCTACAAAGATAGTACGTGGATCATGCAACTTCTGAGTGACAATCTGACTCTTTGGAATTCTGACATCCCAGAAGATGGAGAAAAGTCCCAGAAAGCAAACGACACTGCTAAGCTTGGTGGAGGTGATGATGTTAGAGTGACTGTGAGGCCAATGGTTGGTTGGTGA 558 0.4301 MDATTGQSLYPLHHSKTIHLVRHAQGVHNVEGEKNHDAYLSDDLFDANLTPLGWKQFVRALVILCWVKQGKPKSTISRLHFLVLISLATSVTTKLKTRSMEVGNKIMAEENDGCQAFDEAISELNTLNTESYKDSTWIMQLLSDNLTLWNSDIPEDGEKSQKANDTAKLGGGDDVRVTVRPMVGW 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00734 185 PRINTS 14-3-3 protein zeta signature 96 122 IPR000308 -
Trre12g00734 185 PRINTS 14-3-3 protein zeta signature 123 152 IPR000308 -
Trre12g00734 185 SUPERFAMILY Phosphoglycerate mutase-like 16 60 IPR029033 -
Trre12g00734 185 Pfam 14-3-3 protein 115 150 IPR023410 -
Trre12g00734 185 Gene3D - 85 166 IPR036815 -
Trre12g00734 185 Gene3D - 3 67 IPR029033 -
Trre12g00734 185 SUPERFAMILY 14-3-3 protein 115 158 IPR036815 -
Trre12g00734 185 PANTHER 14-3-3 PROTEIN 115 153 IPR000308 -
Trre12g00734 185 MobiDBLite consensus disorder prediction 153 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00734 Trre-Chr12 6334253 6337041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00734 115 180 14-3-3 family AT2G42590 69.118 9.17e-23 90.5