Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00733 ATGGCTTCTTCTTTATCTTTAAATTCCACTACCCAACTTGTGCTTCTCTTTGCTCTTTTCTCTTGTCTACAATTTTCTATTGTAGCTTCTTCTCAAGAATTTCAAGTTGGTGGCTTAAAAGGTTGGGTTGTTCCACCTTCCAATGACACTGATATGTACAATGTTTGGGCTTCCAATAATAGGTTCCAAATTGGTGACTCCATCCATTTCAAATACAAGAAGGATTCAGTGATGGAAGTAGGCAAGGAAAATTACAATGATTGCAATGCAACACAACCAACATTTTTCTCAAACAATGGAAACACTGAATTCAAGCTAAATCATTCAGGAACATTCTACTTCATTAGTGGTGCATCAGGACATTGTGAAAAAGGACAAAAAATGATTGTGAGGGTGATGATTCAAGATGTTCATCCCAAGTCTTCTGCCTACCATGTTCCTGTTTTTTCAATTGGTGTCTTTGAAATTATATTTGTTTTAGCATTTGTTGCTTCCCATTTAATTTGA 507 0.357 MASSLSLNSTTQLVLLFALFSCLQFSIVASSQEFQVGGLKGWVVPPSNDTDMYNVWASNNRFQIGDSIHFKYKKDSVMEVGKENYNDCNATQPTFFSNNGNTEFKLNHSGTFYFISGASGHCEKGQKMIVRVMIQDVHPKSSAYHVPVFSIGVFEIIFVLAFVASHLI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00733 168 CDD OsENODL1_like 33 133 IPR041846 -
Trre12g00733 168 Gene3D - 31 137 IPR008972 -
Trre12g00733 168 FunFam Early nodulin-like protein 1 31 137 - -
Trre12g00733 168 PANTHER BLUE COPPER PROTEIN 32 132 IPR039391 GO:0009055
Trre12g00733 168 SUPERFAMILY Cupredoxins 32 133 IPR008972 -
Trre12g00733 168 ProSiteProfiles Phytocyanin domain profile. 32 134 IPR003245 GO:0009055
Trre12g00733 168 Pfam Plastocyanin-like domain 51 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00733 Trre-Chr12 6331233 6332356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00733 7 133 Phytocyanin Superfamily AT3G18590 53.906 7.87e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00733 - - lang:109346935 213.001