Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00722 ATGGAAACACTTAAGAAACATCTCATTGCAACTCTTTTTGTGATTTTGGTCATGAGCAATGTGTCTCTAACAAGATCAAAGAAGAGTGAGAATGAGAAGATTTGTTACATAGTACATGTTGCCAAATCCAAAATGCCAACAACCTTCAATCACCATTCAATCTGGTATGCATCAATCCTTAAGTCGGTATCTGAGTCGGCTGAAATGCTCTACACCTATAACAATGCAATTAATGGATTCTCAACAAGTTTGACAGTTGAAGAACTCCAGTCACTAAAGAGCCATGTTGGGGTTCTTAAGGTGACACTAGATAGAAAGCACAAACTTTTCACAACTCGAACACCTAAGTTCCTTGGGCTCGATAAAATTACTAGTAGATTCCCCACAACAAACAAAAGTAGTGACATAATTGTGGGACTCCTAGACACAGGTGTATGGCCTGAAAGCAAGAGTTTTGATGATACCGAGTACGATTCAATACCCCACACTTGGAAAGGAAAATGTGAAGTAAGTACCAATTTCACGGCATCAAATTGTAATAAGAAATTGATTGGTGCGAGGTTCTACGCAAAGGGATTCGAGGCATCAATGGGTTCGATTAATGAAGCCACCGTGTCTAGGTCGCCTAGAGATGATTTTGGCCATGGAACCCACACGGCGAGTACAGCTGTAGGATCTCCAGTGGTGAATGCAAATTTTTTCGGGTTAGCCAATGGGACAGCACGTGGGATGGCTGTTGGTGCTAGAGTTGCTATCTATAAGGTTTGTTGGATAAATGGATGTCACGATTCTGATATATTGGCTGCAATTGACCAGGCAATTGCCGACAACGTCAATATTCTTTCTTTGTCTTTTGGAAGTATAGCAAAGCATTATTTTAATGACAACATTGCAATTGGAGCCTTTGCAGCAATTGAGCACGGGATTCTCGTTTCATGCGCTGCAGGAAACTTTGGTCCTTTACATTCAACTGTAACAAATATAGCACCTTGGATTACCACTGTGGGTTTCGGCACACTTGATCGAGATTTTCCTGCATATGTCAGTCTTGGAAATGGAAAAAAATACTCAGGTGCAACCTTTTCTAACGGTAGTTCTTTGCCCAATACTTTATTGCCATTCATATATGCAGGAAATGCAAGCAATGATGAAGAAAAAGGTCTCGGCACATGTCTTCCAGATAGCTTAGATCCAAAGAAGGTATTTGGAAAGATTGTGTTGTGTGATCTTGGAGAGAATTCAGAAATTGCGAAAGGAAATACAGTAAAATCTGCTGGTGGTTTGGGTATGGTGTTAGCCAACACTAAGAAATATGGAGAAGACACTGTGGCAAATGCCTACTTGATGCCAGCAATTAATGTGGGCTACAAATATGGTGAAGCTATAAAAAAATACTTATTTTCTGATCCAAAACCGATGGGAACAATTGTGTTTCAGGGAACAAAGATCGGGGTTAAGCCGTCGCCTATTGTTGGAAAGGAAAGCTCAAGAGGCCCCAGTTCAGTAACCCCACAAATATTGAAGCCTGATTTAATTGCACCAGGTGTTAACATCTTAGCAGCATATACAAGGAATTTGAGTCCCACATGTTTGGACTCAGATCCTAGGCGTGTAGATTTCACCTTTATGTCAGGCACATCAATGGCATGCCCTCATGTAAGTGGATTAGCGGCATTGATCAAGTCAGTTCATCCTAAATGGAGCCCAGCTGCCATTCGATCTGCACTGATGACAACAGCTTATACAACTTACAAGAACAATCAAACACTATTGGATCATGCAAACAAAAATCCAGCAACTCCTTTTGATTTTGGTGCTGGACACGTCGACCCTATTTCCGCACTAAATCCTGGACTTGTCTATGATTTGACAGTGGATGATTATTTGAGCTTCCTCTGTGCATTGAACTACTCAACTGCTAATATTGAAATTGTGGCGAGGAGAAAGTACACATGTGACCCAACGAAACAATACAGTGTGGCAAACCTTAATTACCCTTCCTTTGTTGTGGTCTTCGAGGGCGAACATAGTGTAGAGGAGATTAAATACACTCGCACTCTTACCAATGTGGGTTACGCAAGAACATACAAGGTATCAGTTAAGTCAAATGATCCTTCTGTTAACATCTCAATTGAACCAGAAGTGTTAAGTTTTAAGAGAAATGAGAAAAAATTATACACAGTTACATTTACGACATCTGGTTCGAAACCAAATAGTTCTCAAAGTTTTGGAAGGTTAGAATGGTCTGATGGAAAAATTGTTGTTAAAAGTCCTATAGCATTTATTTGGAAATTGCACTGA 2301 0.4029 METLKKHLIATLFVILVMSNVSLTRSKKSENEKICYIVHVAKSKMPTTFNHHSIWYASILKSVSESAEMLYTYNNAINGFSTSLTVEELQSLKSHVGVLKVTLDRKHKLFTTRTPKFLGLDKITSRFPTTNKSSDIIVGLLDTGVWPESKSFDDTEYDSIPHTWKGKCEVSTNFTASNCNKKLIGARFYAKGFEASMGSINEATVSRSPRDDFGHGTHTASTAVGSPVVNANFFGLANGTARGMAVGARVAIYKVCWINGCHDSDILAAIDQAIADNVNILSLSFGSIAKHYFNDNIAIGAFAAIEHGILVSCAAGNFGPLHSTVTNIAPWITTVGFGTLDRDFPAYVSLGNGKKYSGATFSNGSSLPNTLLPFIYAGNASNDEEKGLGTCLPDSLDPKKVFGKIVLCDLGENSEIAKGNTVKSAGGLGMVLANTKKYGEDTVANAYLMPAINVGYKYGEAIKKYLFSDPKPMGTIVFQGTKIGVKPSPIVGKESSRGPSSVTPQILKPDLIAPGVNILAAYTRNLSPTCLDSDPRRVDFTFMSGTSMACPHVSGLAALIKSVHPKWSPAAIRSALMTTAYTTYKNNQTLLDHANKNPATPFDFGAGHVDPISALNPGLVYDLTVDDYLSFLCALNYSTANIEIVARRKYTCDPTKQYSVANLNYPSFVVVFEGEHSVEEIKYTRTLTNVGYARTYKVSVKSNDPSVNISIEPEVLSFKRNEKKLYTVTFTTSGSKPNSSQSFGRLEWSDGKIVVKSPIAFIWKLH 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00722 766 CDD PA_subtilisin_like 347 476 - -
Trre12g00722 766 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Trre12g00722 766 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Trre12g00722 766 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Trre12g00722 766 SUPERFAMILY Subtilisin-like 109 619 IPR036852 GO:0004252|GO:0006508
Trre12g00722 766 FunFam Subtilisin-like protease SBT1.9 24 110 - -
Trre12g00722 766 Gene3D - 632 762 - -
Trre12g00722 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 110 IPR037045 -
Trre12g00722 766 Gene3D - 341 484 - -
Trre12g00722 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Trre12g00722 766 CDD Peptidases_S8_3 107 581 IPR034197 -
Trre12g00722 766 Pfam Subtilase family 133 607 IPR000209 GO:0006508|GO:0008236
Trre12g00722 766 Gene3D Peptidase S8/S53 domain 135 628 IPR036852 GO:0004252|GO:0006508
Trre12g00722 766 Pfam Peptidase inhibitor I9 36 109 IPR010259 -
Trre12g00722 766 ProSiteProfiles Serine proteases, subtilase domain profile. 117 615 - -
Trre12g00722 766 FunFam subtilisin-like protease SBT1.5 341 483 - -
Trre12g00722 766 FunFam Subtilisin-like protease SBT1.5 135 354 - -
Trre12g00722 766 Pfam Fibronectin type-III domain 662 760 IPR041469 -
Trre12g00722 766 Pfam PA domain 386 462 IPR003137 -
Trre12g00722 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 760 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00722 Trre-Chr12 6243198 6245498 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00722 8 763 Subtilisin-like Serine Gene Family AT5G67360 60.686 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00722 - - gmx:100815413 945.651