Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00719 ATGAGCAATGTGTCTCCAACTAGAACAAAGAAGAGTGAGAATGAGAATATTAGTTACGTAGTTCATGTTGCAAAATCTGAAATGCCAACAAGCTTTAATCACCATTCAATCTGGTATGAATCAATTCTTAAGTCGGTATCTGAGTCAGCTGAAATACTCTACACCTATAATAATGCAATTAATGGATTTTCAACAAGTTTGACAGTTGAAGAACTTCAGTCAATAAAGAGCCAAGTTGAGGTTCTTCGGGTGACACCAGATAGAAAGTACGAACTTTTCACAACTCGAACACCTGAGTTCCTTGGGCTTGATAAAATTTCAAGTACATTCCCCACAACAAACAAAAGTAGTGACATAATTGTGGGACTCCTCGACACAGGTGTATGGCCTGAAAGCAAGAGCTTTGATGATACCGGATATGGGCCAATACCCCACACTTGGAAAGGAAAATGTGAAATTGGTACCAATTTCACAACCTTGAATTGTAATAAGAAATTGATTGGTGTGAGGTTCTTTGTAAAGGGATATGAGGCATCTGTGGGTCCGATTAATGAAACTATGGAGTCTAGGTCGCCTCGAGATGATCTTGGCCATGGAACCCACACGGCGAGCACAGCTGTAGGATCACCAGTGGAGAATGCAAAAATTTTCGGCTACGCCAATGGGACAGCACGTGGGATGTTTGTTGGCGCTAGAGTTTCTATCTACAAGGTTTGCTGGAAAAAAGCATGTAGGGCCTCTGATGTATTGGCTGCAATCGATCAAGCAATTGCCGATAATGTCAATATTCTTTCTTTGTCTCTTGGAGGTCCAGCAAGGAATTATTTTGATGACATCATTGCAATTGGAGCCTTTGCAGCTATAGAGCATGGGATTCTTGTTTCATGCGCTGCAGGAAACTTTGGTCCTTTACATTCAACTGTCACAAATATAGCACCTTGGATTACCACTGTGGGTTCCAGCACACTCGATCGAGATTTTCTTACATATGTCAATCTTGGAAATGGAAAAAAATACGCAGGTACAACCTTTTCTAAGGGAAGTTCTTTTCATGGAACTCTATTGCCATTCATATATGCAGGAAATGCAAGCAATGATGAAGGAAAAGGTCTCGGTACATGTCTTCCAGGTAGCTTAGATCCAAAGAAGGTAACAGGAAAGATTGTGTTGTGTGATCGTGGAGAGAATACTAGAATTGAGAAAGGAAATCTAGTAAAATCTGTTGGTGGTTTGGGTATGGTGGTAGCCAACAATAAGGAAGATGGAGAAGAGACTGTGGCAGATGCCTACTTTATGCCAGCAATAAATGTGGGCTATAAATATGGTGAAGCTATAAAAAAAATACTTATTTTCCGATCTAAAACCGATGGGCACACTTGTATTTCAGGGAACAAAGATCGGGGTTGA 1407 0.4065 MSNVSPTRTKKSENENISYVVHVAKSEMPTSFNHHSIWYESILKSVSESAEILYTYNNAINGFSTSLTVEELQSIKSQVEVLRVTPDRKYELFTTRTPEFLGLDKISSTFPTTNKSSDIIVGLLDTGVWPESKSFDDTGYGPIPHTWKGKCEIGTNFTTLNCNKKLIGVRFFVKGYEASVGPINETMESRSPRDDLGHGTHTASTAVGSPVENAKIFGYANGTARGMFVGARVSIYKVCWKKACRASDVLAAIDQAIADNVNILSLSLGGPARNYFDDIIAIGAFAAIEHGILVSCAAGNFGPLHSTVTNIAPWITTVGSSTLDRDFLTYVNLGNGKKYAGTTFSKGSSFHGTLLPFIYAGNASNDEGKGLGTCLPGSLDPKKVTGKIVLCDRGENTRIEKGNLVKSVGGLGMVVANNKEDGEETVADAYFMPAINVGYKYGEAIKKILIFRSKTDGHTCISGNKDRG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00719 468 Gene3D - 324 449 - -
Trre12g00719 468 Gene3D Peptidase S8/S53 domain 118 323 IPR036852 GO:0004252|GO:0006508
Trre12g00719 468 ProSiteProfiles Serine proteases, subtilase domain profile. 100 468 - -
Trre12g00719 468 CDD PA_subtilisin_like 330 447 - -
Trre12g00719 468 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 93 IPR037045 -
Trre12g00719 468 SUPERFAMILY Subtilisin-like 92 362 IPR036852 GO:0004252|GO:0006508
Trre12g00719 468 MobiDBLite consensus disorder prediction 185 206 - -
Trre12g00719 468 Pfam PA domain 374 445 IPR003137 -
Trre12g00719 468 Pfam Peptidase inhibitor I9 18 92 IPR010259 -
Trre12g00719 468 FunFam subtilisin-like protease SBT1.5 324 462 - -
Trre12g00719 468 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 449 IPR045051 -
Trre12g00719 468 FunFam Subtilisin-like protease SBT1.9 7 93 - -
Trre12g00719 468 Pfam Subtilase family 116 322 IPR000209 GO:0006508|GO:0008236
Trre12g00719 468 CDD Peptidases_S8_3 90 323 IPR034197 -
Trre12g00719 468 SUPERFAMILY PA domain 356 433 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00719 Trre-Chr12 6225576 6226982 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00719 12 446 Subtilisin-like Serine Gene Family AT5G67360 60.092 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00719 - - cave:132186275 577.015