Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g00718 ATGAAGCCTGATTTAATTGCTCCTGGTGTTAAAATCTTAGCAGCATATACAAGGAATTTGAGTCCCACACATTTGGATTCAGATCCTAGGCGTGTAGATTTCAACTTTTTGTCAGGAACATCAATGGCATGCCCTCATGTAAGTGGATTAGCGGCTTTAGTGAAGTCAGTTCATCCAAAATGGAGCCCAGCTGCCATTCGATCTGCATTAATGACAACAGCTTATACAACTTACAAGAACAATCAAACATTATTGGATGATGAAACAAAAAGTCCAGCAACTCCATTTGATTTTGGTGTTGGACACGTCAACCCTATTTTGGCACTAAATCCTGGACTTGTCTATGATTTGACAGTGGATGATTATTTAAGCTTCCTATGTGCATTGAACTACTCAACTGCTAATATTGAAATTGTGGCGAGGAGAAAGTACACATGCGACCCAAAGAAACAATACAGTGTAACAGACCTTAATTATCCTTCCTTTGTCGTGGTATTCGAGGGCAGACATAGTGTAGAGGAGATTAAATATACACGAACTCTTACAAATGTGGGTTCCGCAAGAACATACAAAGTATCAGTTAAGTCAAATGCCCCATCTGTTAAGATCTCAATTGAACCAAAAGTGTTAAGTTTTAAGAGAAATGAGAAAAAGTTATACACAGTTACCTTTACGACATCTGGTTTGAAACCAAATAGCCCTCAAAGTTTTGGAAGGTTAGAATGGTCCGATGGAAAAATAGTGGTTAAAAGTCCTATAGCATTTATTTGGAAATTACGCTGA 783 0.3793 MKPDLIAPGVKILAAYTRNLSPTHLDSDPRRVDFNFLSGTSMACPHVSGLAALVKSVHPKWSPAAIRSALMTTAYTTYKNNQTLLDDETKSPATPFDFGVGHVNPILALNPGLVYDLTVDDYLSFLCALNYSTANIEIVARRKYTCDPKKQYSVTDLNYPSFVVVFEGRHSVEEIKYTRTLTNVGSARTYKVSVKSNAPSVKISIEPKVLSFKRNEKKLYTVTFTTSGLKPNSPQSFGRLEWSDGKIVVKSPIAFIWKLR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g00718 260 Pfam Subtilase family 1 101 IPR000209 GO:0006508|GO:0008236
Trre12g00718 260 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 254 IPR045051 -
Trre12g00718 260 Pfam Fibronectin type-III domain 156 254 IPR041469 -
Trre12g00718 260 ProSitePatterns Serine proteases, subtilase family, serine active site. 39 49 IPR023828 -
Trre12g00718 260 Gene3D Peptidase S8/S53 domain 1 122 IPR036852 GO:0004252|GO:0006508
Trre12g00718 260 ProSiteProfiles Serine proteases, subtilase domain profile. 1 109 - -
Trre12g00718 260 SUPERFAMILY Subtilisin-like 3 116 IPR036852 GO:0004252|GO:0006508
Trre12g00718 260 Gene3D - 126 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g00718 Trre-Chr12 6224732 6225514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g00718 1 257 Subtilisin-like Serine Gene Family AT5G67360 65.504 2.38e-114 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g00718 - - lja:Lj3g3v3349720.1 358.992